Query= MSMg01no135_d21.b1 MSMg01no135_d21.b1 CHROMAT_FILE:
MSMg01no135_d21.b1 PHD_FILE: MSMg01no135_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:19 2005
(644 letters)
>mm_chr15_50264607_50265650
Length = 1044
Score = 1195 bits (618), Expect = 0.0
Identities = 632/640 (98%), Gaps = 6/640 (0%)
Strand = Plus / Plus
Query: 5 gaattcactctgtagaccaggctggcctcaaactcagaaattcacctgcctctacctccc 64
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 211 gaattcactctgtagaccaggctggcctca------gaaattcacctgcctctacctccc 264
Query: 65 aagtgctagaattaaaggtgtgtgccatcaccgcctggctagaatgtgcttttctaacag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aagtgctagaattaaaggtgtgtgccatcaccgcctggctagaatgtgcttttctaacag 324
Query: 125 aacaattttaatgaacaatcagaaaaaaaattcttcatatcatgacaatgaggtactaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aacaattttaatgaacaatcagaaaaaaaattcttcatatcatgacaatgaggtactaaa 384
Query: 185 gagctcattatatattggtatgtagagctgaataggacctggactataaattagaattac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gagctcattatatattggtatgtagagctgaataggacctggactataaattagaattac 444
Query: 245 cataaaatagagttttcctttgaaaagagtttaaagaatttcatataccaaaaagtcttc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cataaaatagagttttcctttgaaaagagtttaaagaatttcatataccaaaaagtcttc 504
Query: 305 tgtctgatataaggcaaatatccttaacaaattaatcaacatctttctttaaaaaatact 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 tgtctgatataaggcaaatatccttaacaaattaatcaacatctttctttaaaaaatact 564
Query: 365 tcatgaacaaatgcattcattttcttaagataatctcaagtgtggtcttactgacctaaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tcatgaacaaatgcattcattttcttaagataatctcaagtgtggtcttactgacctaaa 624
Query: 425 atgtatataacctgttatatctctaaatgctgtccatcattgtctaatgcagctggtcta 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atgtatataacctgttatatctctaaatgctgtccatcattgtctaatgcagctggtcta 684
Query: 485 atttctactatcatcatcaacagttcaaaactcttagggatccacttctttatcagggca 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 685 atttctactatcatcatcaacagttcaaaactcttagggatccacttctttatcaggtca 744
Query: 545 tcatatccaaaagtttgtgttttttccattctgaaggacaaaaaaggtctttttacagtt 604
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 tcatatccaacagtttgtgttttttccattctgaaggacaaaaaaggtctttttacagtt 804
Query: 605 ttaatctcattttccgattgactagtaaactaatttctca 644
||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttaatctcattttccgattgactagtaaactaatttctca 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_d21.g1 MSMg01no135_d21.g1 CHROMAT_FILE:
MSMg01no135_d21.g1 PHD_FILE: MSMg01no135_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:19 2005
(615 letters)
>mm_chr15_50439453_50440467
Length = 1015
Score = 998 bits (516), Expect = 0.0
Identities = 519/520 (99%)
Strand = Plus / Minus
Query: 96 tatggtgtctttggtaggcagcaatggtgaaattcacaaatcacggctcaaaggcttctg 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1015 tatggtgtctttggtaggcagcaatggtgaaattcacaaatcacggctcaaaggcttctg 956
Query: 156 tttctggcatgatggaaggccatatattcagaaaacccttccagtgttgtacatctgaaa 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 tttctggcatgatggaaggccatatattcagaaaacccttccagtgttgtacatctgaaa 896
Query: 216 aacgctgagctaaatatttacatttattaaaagcatggttccaatagtaaaggaatggaa 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 aacgctgagctaaatatttacatttattaaaagcatggttccaatagtaaaggaatggaa 836
Query: 276 atgatcaaccgccagaaatgttcaaatccagatgtgtaagcaagtactagctctggcaca 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 835 atgatcaaccgccagaaatgttcaaatccagatgtgtaagcaagtactagctctggcaca 776
Query: 336 cagaggatggcaaccccaatggctgcatttttagatcatgagttgaaataggtttatatt 395
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 cagaggatggcaaccccagtggctgcatttttagatcatgagttgaaataggtttatatt 716
Query: 396 ttcagtagaccagataagaaaccagtgggccaactgactgggagctaacaaggcagatct 455
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 ttcagtagaccagataagaaaccagtgggccaactgactgggagctaacaaggcagatct 656
Query: 456 tgtataaaacttggaaacaaaataataatatactctcaaggaaaaaaataccttcacaca 515
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tgtataaaacttggaaacaaaataataatatactctcaaggaaaaaaataccttcacaca 596
Query: 516 ctagaaggtctgtgcttgctcatctctctcagttgtctgctggcttgctacagcaacaat 575
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 ctagaaggtctgtgcttgctcatctctctcagttgtctgctggcttgctacagcaacaat 536
Query: 576 tggttcctattcaagatgcctaaccacaggttttcatata 615
||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 tggttcctattcaagatgcctaaccacaggttttcatata 496
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
