Query= MSMg01no135_m10.b1 MSMg01no135_m10.b1 CHROMAT_FILE:
MSMg01no135_m10.b1 PHD_FILE: MSMg01no135_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:58 2005
(187 letters)
>mm_chr15_30584766_30585352
Length = 587
Score = 346 bits (179), Expect = e-100
Identities = 185/187 (98%)
Strand = Plus / Minus
Query: 1 ttaccttctcgacgccttttctgagaccacagtcacacattacatctctggaacgtgact 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 387 ttaccttctcgacgccttttctgagaccccagtcacacattacatctctggaacgtgact 328
Query: 61 tggctcttcctgcaccagtcttctactttctgcctctgttcctttactccctaccttctg 120
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 327 tggctcttcctgcaccagtcttctactttctgcctctgtttctttactccctaccttctg 268
Query: 121 tgttagctccttaactatttcccagccatttcatcaattattgttttagttttatgagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgttagctccttaactatttcccagccatttcatcaattattgttttagttttatgagtt 208
Query: 181 atgtttt 187
|||||||
Sbjct: 207 atgtttt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no135_m10.g1 MSMg01no135_m10.g1 CHROMAT_FILE:
MSMg01no135_m10.g1 PHD_FILE: MSMg01no135_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:51:59 2005
(388 letters)
>mm_chr15_30457580_30458367
Length = 788
Score = 669 bits (346), Expect = 0.0
Identities = 382/404 (94%), Gaps = 16/404 (3%)
Strand = Plus / Plus
Query: 1 cttgaatgccatcagctaaaaatcagactctacagtacttgtccctcctccccacttatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 cttgaatgccatcagctaaaaatcagactctacagtacttgtccctcctccccacttatt 244
Query: 61 ggatctttttggaagtctttggatatttgaggatatcttcatgaagaaggacgatttgaa 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 ggatcttttgggaagtctttggatatttgaggatatcttcatgaagaaggacgatttgaa 304
Query: 121 gcttactgaactagctctctctctctctctctctctctctctct---------------- 164
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gcttactgaactagctctctctctctctctctctctctctctctctctctctctctctct 364
Query: 165 ggttcatattagtaaagggtgcttagagttgttgccagggaatctgctgtgtgcatactt 224
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 365 ggttcatattagtaaagggtgcttagacttgttgccagggaatctgctgtgtgcatactt 424
Query: 225 ggttaccgtctccacggtctcctcctgtccttgagatcaaacctccgcacaggccaggtt 284
||||||||||||||| ||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct: 425 ggttaccgtctccacagtctcctgctgtccttgagatcaaacctcagcacaggccaggtt 484
Query: 285 ccatgtgtcagctacatgttcagctcagcctgtgcttatggtagtagggccgtagctcca 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ccatgtgtcagctacatgttcagctcagcctgtgcttatggtagtagggccgtagctcca 544
Query: 345 acagtcccaggattcttccccagcacactgtcatcatgatggaa 388
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 545 acagtcccaggattcgtccccagcacactgtcatcatgatggaa 588
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 4
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 788
Length adjustment: 9
Effective length of query: 379
Effective length of database: 779
Effective search space: 295241
Effective search space used: 295241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
