Query= MSMg01no135_p03.b1 MSMg01no135_p03.b1 CHROMAT_FILE:
MSMg01no135_p03.b1 PHD_FILE: MSMg01no135_p03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:10 2005
(353 letters)
>mm_chr15_28693814_28694566
Length = 753
Score = 644 bits (333), Expect = 0.0
Identities = 348/353 (98%)
Strand = Plus / Plus
Query: 1 ggacttttctcatgaattggtgtaacagttcacaagctggaaaccattcattcaaatatg 60
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ggacttttctcatgaatgggtgtaacagttcacaagctggaaaccattcattcaaatatg 260
Query: 61 tgaacctgtgtgtccattctcactctaaccaccaaaggagtctttgagtctatgacttcg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 261 tgaacctgtgtgtccattctcactctaaccaccaaaggagtctttgagtctatgactttg 320
Query: 121 ttctatttacaaaaatcctttcaactgtgaatagttctctacttttctgacaagtagctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttctatttacaaaaatcctttcaactgtgaatagttctctacttttctgacaagtagctt 380
Query: 181 tcttctaagtggaaataaaatagatactttaaaagattttacacatgtactatataatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcttctaagtggaaataaaatagatactttaaaagattttacacatgtactatataatat 440
Query: 241 gtctttaaatgataacatttattaacaagttagtatttctattatttaacataatctgtt 300
|||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 gtctgtaaatgataacatttattaacaatttagtatttctattatttaacataatctgtt 500
Query: 301 gtttcagaagagacagtacatttccctcatcaattaatatttattgatcatta 353
|||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtttcagaagagtcagtacatttccctcatcaattaatatttattgatcatta 553
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 353
Length of database: 753
Length adjustment: 9
Effective length of query: 344
Effective length of database: 744
Effective search space: 255936
Effective search space used: 255936
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no135_p03.g1 MSMg01no135_p03.g1 CHROMAT_FILE:
MSMg01no135_p03.g1 PHD_FILE: MSMg01no135_p03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:11 2005
(634 letters)
>mm_chr15_28824876_28825910
Length = 1035
Score = 1137 bits (588), Expect = 0.0
Identities = 621/632 (98%), Gaps = 2/632 (0%)
Strand = Plus / Minus
Query: 5 ggaaagtgacttctttctcgcaacagcagaaaattgtcaatagctcccaggctagatata 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 ggaaagtgacttctttctcgcaacagcagaaaattgtcaatagctcccaggctagatata 641
Query: 65 acactgtaccagctcctctcttcattgattcaggttctgggcata-gtggacatgcatca 123
||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 640 acactgtactagctcctctcttcattgattcaggttctgggcatacttggacatgcatca 581
Query: 124 gaagaaagatgaacttgaccttattttatacctttacaactcaaagccatgtacaaacat 183
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gaagaaagctgaacttgaccttattttatacctttacaactcaaagccatgtacaaacat 521
Query: 184 aaacacttataatcccaaatatacgcaagagtaagggagaggtaggttaagtttgagacc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 aaacacttataatcccaaatatacgcaagagtaagggagaggtaggttaagtttgagacc 461
Query: 244 tgcctgaccatcataaaaaggttttataaagacattagtgatcatctcaaaatagaagac 303
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 460 tgcctgaccatcataaaaaggttttataaagacattagtgatcacctcaaaatagaagac 401
Query: 304 atgaaagtactagaaaataggatcagaaacactccaagaagttgccttaggtgttaattt 363
|||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||
Sbjct: 400 atgaaagtactagaaaataggatcggaaacactctaagaagttgccttaggtgttaattt 341
Query: 364 ctatgacctcaaagcaaatgtacattaaagattgaactaaaatcttacaacaaagaaaat 423
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 340 ctatgacctcaaagcaaatgtacatttaagattgaactaaaatcttacaacaaagaaaat 281
Query: 424 aatcatcaaatacaagatacaacctacatgtgggaagatactgactagctgacaaaatat 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 aatcatcaaatacaagatacaacctacatgtgggaagatactgactagctgacaaaatat 221
Query: 484 gaatatctatgatctct-aaaaaatcaaaatatttaatgtaaagtaaaatctttaatctt 542
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gaatatctatgatctctaaaaaaatcaaaatatttaatgtaaagtaaaatctttaatctt 161
Query: 543 taattatttaaatgattccacttataagaagaaatacatattggcaacaaatatataaaa 602
||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||
Sbjct: 160 taattatttaaatgattccccttataagaagaaatacatattgtcaacaaatatataaaa 101
Query: 603 caaattctatacaattagctgccagggaaagc 634
||||||||||||||||||||||||||||||||
Sbjct: 100 caaattctatacaattagctgccagggaaagc 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1035
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1025
Effective search space: 639600
Effective search space used: 639600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
