TTTTAATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGC
GCGGAATTCGGAAGCTTCTCAGAACTGGGAGGGAGCAGACTGAGCAGGCT
CCATCCCCAGGGCAGGGCTCCATCCTTGCTTTAAGGCAGTCCAGGTGGTG
TCCTTCGGTGGGGGAGCTTTTGAATTTAAGTAGAGGGTGGAAGCCTGAAG
GTGGATGAGGGGCTTTTTTTTTTTTTGACAGGGTTTCTCTGTGTAGCCCT
GGCTGTCCTGGAACTCACTCTGTAGACCAGGCTGGCCTCGAACTCAGAAA
TCCTCCTGTCTCTGCCTCCCAAGTGCTGGGATTATAGGCATGTGCCACCA
CAGCCCAGCGGATGAGGGGCTTTAAAATGCTGGTCTGTTTTTGTTGTGGT
CTTTGTTGTTCAGGGGGAGAGGATGTGTGGCAAAGAGTATGCTTGCTTTC
CTTTTAATGGAGTACAATCAATTGTAGGTTTGAGCATGAACAGGTATCTA
GGCTTGCAACTGAAGACTGTAATCGCTATAACCACTGTCCAGTTATTACT
GGATCTAATTTTGTTATTTGCCTTCATTCTTTTTATATAGCTCTTCGACA
GTTACAGTTAAAATGCAAAGTTTATTCCATAAAAGCAACCTTAAGCAAAG
TCAAGCAGCCTATTGATTAATGATGGGAAACTCTGCAAGTGGAAACTCAT
CTTCTCCAGTTTTTCC

NNNNCCGATGCAGTGGGAGGCTGGCGGCGCCTGGTCCAAAATTGGGGTGA
CCTATAGAATTTCCGCGGAATTCATGCAGTTGAATCCTTCTCAACAGTCT
GTTTTACGGGAACCTTTATTACTGTGACCCGCAGTTCTGGTTCTGGAATG
AGGGATCTTCCTTGCGCCGGTCCCGAGTTTTCTTGTATTTTTTCGTCCCG
GATTTTTTCTCGTCCCGGATTTCAGCACCAACTCTTATACGCGTTCTCAC
GACCGGCCAGGAAAGAACACAACAAACCAGAATCTTCTGCGGCAAAACTT
TATTGCTTACATCTTCAGGAGCAGGAGCGCAAAACCCCAAGCCCCAAAAA
CGAAAGCGCCCCTCTTACATCTTTAGGAGCCAGAGCGCCAGCGCGCCAGA
GCGAAAGCGCAAGAAGCGCAAGTAAGAGAGCTATTGTTTACATCTTTAAG
AGCAAGCGCGCCAGAGCGCAAGCAAGAGAAGAGAATGGCGGAAACCCCGT
CCCCTTTTTAGGAGAGTTATTCTCCGCCTAGGACGCATCACTCCCTGATT
GGCTGCAGCCCATGGCCGAGTTAAGGCAGAGTACATGTAGTGGTAAAATA
CCCTTGGCACATGCGCAGATTATTTGTTTACCACTTAGAACACAGGATGT
CAGCGCCATCTTGTGACGGCGAATGTGGGGGCGGCTCCCAACAATGGCGC
AGCATTGGATGGT

Query= MSMg01no136_b22.b1 MSMg01no136_b22.b1 CHROMAT_FILE:
MSMg01no136_b22.b1 PHD_FILE: MSMg01no136_b22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:52:24 2005
         (657 letters)



>mm_chr15_3221270_3222326
          Length = 1057

 Score = 1201 bits (621), Expect = 0.0
 Identities = 651/669 (97%), Gaps = 15/669 (2%)
 Strand = Plus / Plus

                                                                       
Query: 3   ggaattcggaagc--ttctcagaactgggagggagcagactgagcaggctccatccccag 60
           |||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ggaattcggaagcaatt-tcagaactgggagggagcagactgagcaggctccatccccag 248

                                                                       
Query: 61  ggcagggctccatccttgctttaaggcagtccaggtggtgtccttcggtgggggagcttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ggcagggctccatccttgctttaaggcagtccaggtggtgtccttcggtgggggagcttt 308

                                                                       
Query: 121 tgaatttaagtagagggtggaagcctgaaggtggatgaggggcttttttttttttt---- 176
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
Sbjct: 309 tgaatttaagtagagggtggaagcctgaaggtggatgaggggcttttttttttttttttt 368

                                                                       
Query: 177 --------gacagggtttctctgtgtagccctggctgtcctggaactcactctgtagacc 228
                   ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ttttttttgacagggtttctctgtgtagccctggctgtcctggaactcactctgtagacc 428

                                                                       
Query: 229 aggctggcctcgaactcagaaatcctcctgtctctgcctcccaagtgctgggattatagg 288
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aggctggcctcgaactcagaaatcctcctgtctctgcctcccaagtgctgggattatagg 488

                                                                       
Query: 289 catgtgccaccacagcccagcggatgaggggctttaaaatgctggtctgtttttgttgtg 348
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 catgtgccaccacagcccagcggatgaggggctttaaaatgctggtctgtttttgttgtg 548

                                                                       
Query: 349 gtctttgttgttcagggggagaggatgtgtggcaaagagtatgcttgctttccttttaat 408
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtctttgttgttcaaggggagaggatgtgtggcaaagagtatgcttgctttccttttaat 608

                                                                       
Query: 409 ggagtacaatcaattgtaggtttgagcatgaacaggtatctaggcttgcaactgaagact 468
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 ggagtacaatcaattgtagttttgagcatgaacaggtatctaggcttgcaactgaagact 668

                                                                       
Query: 469 gtaatcgctataaccactgtccagttattactggatctaattttgttatttgccttcatt 528
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gtaatcgctataaccactgtccagttattactggatctaattttgttatttgccttcatt 728

                                                                       
Query: 529 ctttttatatagctcttcgacagttacagttaaaatgcaaagtttattccataaaagcaa 588
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 729 ctttttatatagctcttcgacagttacagttaaaatgcaaagcttattccataaaagcaa 788

                                                                       
Query: 589 ccttaagcaaagtcaagcagcctattgattaatgatgggaaactctgcaagtggaaactc 648
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 789 ccttaagcaaagtcaagcagcctattgattaatgatgggaaactctgcaagtggaaactc 848

                    
Query: 649 atcttctcc 657
           |||||||||
Sbjct: 849 atcttctcc 857


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space:   677409
Effective search space used:   677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)