Query= MSMg01no137_f05.b1 MSMg01no137_f05.b1 CHROMAT_FILE:
MSMg01no137_f05.b1 PHD_FILE: MSMg01no137_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:58 2005
(245 letters)
>mm_chr15_67025928_67026573
Length = 646
Score = 253 bits (131), Expect = 5e-72
Identities = 149/155 (96%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 1 tgttttatagacaaa-aaaatgtggctcagagaagtttggggtctttccttgtgtcatgc 59
||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 tgttttatagacaaagaaaatgtggctcagagaagtttggggtctttccttgtgtcgtgc 260
Query: 60 agataaaagagaatggaacagtgactacaggccaaactcctgatagtgaagtccagcttt 119
|||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 261 agataaaacagaatggaacagtgactacaggccaaactcctgatagtgaagtcaagcttt 320
Query: 120 atacttatatatgccccttaagaagtgctctaacc 154
|||||||| | ||||||||||||||||||||||||
Sbjct: 321 atacttatctttgccccttaagaagtgctctaacc 355
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 245
Length of database: 646
Length adjustment: 9
Effective length of query: 236
Effective length of database: 637
Effective search space: 150332
Effective search space used: 150332
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no137_f05.g1 MSMg01no137_f05.g1 CHROMAT_FILE:
MSMg01no137_f05.g1 PHD_FILE: MSMg01no137_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:53:59 2005
(224 letters)
>mm_chr15_67190036_67190661
Length = 626
Score = 402 bits (208), Expect = e-117
Identities = 221/226 (97%), Gaps = 2/226 (0%)
Strand = Plus / Minus
Query: 1 tgaatgaatgaacagtgaaggagagtgtgagggtgccaagtccccaggccctgaggaaaa 60
||||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||
Sbjct: 426 tgaatgaatgaacagtgaaggagagtgtgagggtgccaagtcctcaggccccgaggaaaa 367
Query: 61 aagttttctcctgcaagcatatattgcactaacaacaaatggcataacttacagccctgt 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 366 aagttttctcctgcaagcatatattgcactaacaacaaatggtataacttacagccctgt 307
Query: 121 agaccagaggaatctcttaggacaaggatttgtttacg--cagttttatatctagcactt 178
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 306 agaccagaggaatctcttaggacaaggatttgtttacgcacagttttatatctagcactt 247
Query: 179 taagaaaattcatgattggtgggaacattctggaacagagttgtga 224
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 taagaaaattcatgattggtgggaacattctggaacagagttgtga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 224
Length of database: 626
Length adjustment: 9
Effective length of query: 215
Effective length of database: 617
Effective search space: 132655
Effective search space used: 132655
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
