Query= MSMg01no138_g17.b1 MSMg01no138_g17.b1 CHROMAT_FILE:
MSMg01no138_g17.b1 PHD_FILE: MSMg01no138_g17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:27 2005
(599 letters)
>mm_chr15_61437768_61438767
Length = 1000
Score = 835 bits (432), Expect = 0.0
Identities = 453/462 (98%), Gaps = 5/462 (1%)
Strand = Plus / Minus
Query: 4 gaattcttggaac---taccggaagcatgtcttcatgtaatgaatgtgcagttattgaag 60
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gaattcttggaacaaaaa--ggaagcatgtcttcatgtaatgaatgtgcagttattgaag 403
Query: 61 cacaaaggctggacataaaagccatttatttgactaacttatgattatttaagatatggt 120
|| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 402 caaaaaggctggacataaaagccatttatttgactaacttatgattatttaatatatggt 343
Query: 121 ctgattaaaatatgagacaacaatgtatttactcaaagtaaagaggacagaaggatcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ctgattaaaatatgagacaacaatgtatttactcaaagtaaagaggacagaaggatcact 283
Query: 181 ccacataagagagctgtctgtttataggtgtggagatagtttccaagatggctactatcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ccacataagagagctgtctgtttataggtgtggagatagtttccaagatggctactatcc 223
Query: 241 acactgctacttacttcatatctaggccaacattagtgattgattagctaatagaatttg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 acactgctacttacttcatatctaggccaacattagtgattgattagctaatagaatttg 163
Query: 301 gcagaaacgatattctgggacttccaagggaaggtcagaaaaagactcagtatctacttg 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 162 gcagaaacgatattctgggacttccaagggaaggtcagaaaaaggctcagtatctacttg 103
Query: 361 aatctctttgaatattcagtccttgatgtcctgtaacccacttgccacgtgggaagaaac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 aatctctttgaatattcagtccttgatgtcctgtaacccacttgccacgtgggaagaaac 43
Query: 421 ctacatgtcatggacatgacaagttatgttctgattgttgac 462
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 ctacatgtcatggacatgacaagttatgttctgattgttgac 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 1000
Length adjustment: 10
Effective length of query: 589
Effective length of database: 990
Effective search space: 583110
Effective search space used: 583110
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_g17.g1 MSMg01no138_g17.g1 CHROMAT_FILE:
MSMg01no138_g17.g1 PHD_FILE: MSMg01no138_g17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:27 2005
(342 letters)
>mm_chr15_61283147_61283889
Length = 743
Score = 571 bits (295), Expect = e-167
Identities = 334/351 (95%), Gaps = 11/351 (3%)
Strand = Plus / Plus
Query: 1 ttcac-ccaagctctctgttagaactccagtaaaacagacatgactacaacatggaattc 59
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttcacaccaagctctctgttagaactccagtaaaacagacatgactacaacatggaattc 260
Query: 60 cttttatttcccagagtgatgattgctcttaaaagccagaaagcaatctcaggagaagag 119
|||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cttttattccccagagagatgattgctcttaaaagccagaaagcaatctcaggagaagag 320
Query: 120 ggtattagattccctggagcagaattacaggtagggcaagccatgagacatgggtgttga 179
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 ggtattagattccctggagcagaattacaggtagggcaagccttgagacatgggtgttga 380
Query: 180 gaattcaaatactctaaaagagccacaatctttctttacagtcaaacttctctctgacca 239
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaattcaaatactctaaaggagccacaatctttctttacagtcaaacttctctctgacca 440
Query: 240 cgagtctttctattttgagggtaatatgcacatttacccagaaagaactagctaacccca 299
|||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cgagtctttccattttgagggtaatatgcacatttacccagaaagaactagctaacccc- 499
Query: 300 ccaccaccaccaccaccac------gg-g--tccacttctctggaaccaag 341
|| |||||||||||||||| || | ||||||||||||||||||||
Sbjct: 500 cccccaccaccaccaccaccaccatggcggctccacttctctggaaccaag 550
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 342
Length of database: 743
Length adjustment: 9
Effective length of query: 333
Effective length of database: 734
Effective search space: 244422
Effective search space used: 244422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
