Query= MSMg01no138_i20.b1 MSMg01no138_i20.b1 CHROMAT_FILE:
MSMg01no138_i20.b1 PHD_FILE: MSMg01no138_i20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:37 2005
(644 letters)
>mm_chr15_33367491_33368534
Length = 1044
Score = 1218 bits (630), Expect = 0.0
Identities = 639/642 (99%), Gaps = 1/642 (0%)
Strand = Plus / Plus
Query: 4 gaattctctctagt-ttcaagcaggatatatgatcatgttcaacactgggtaaagaatgc 62
||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 gaattctctctagaattaaagcaggatatatgatcatgttcaacactgggtaaagaatgc 262
Query: 63 taaacatggttagatgttaaaatctctttcaatattaatgctacagagagagctatataa 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 taaacatggttagatgttaaaatctctttcaatattaatgctacagagagagctatataa 322
Query: 123 catgaatggtaactttttgctgctttgggtaaggagatatgaaataccattgaagctttc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 catgaatggtaactttttgctgctttgggtaaggagatatgaaataccattgaagctttc 382
Query: 183 ttggattttatggatctattcttgtgttctcttgtaataaaatttttttgtattttaatt 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 ttggattttatggatctattcttgtgttctcttgtaataaaatttttttgtattttaatt 442
Query: 243 tgttttcttttattgcttatacatttatcctaccagccaatgaaaaagaacaaaaaaaaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tgttttcttttattgcttatacatttatcctaccagccaatgaaaaagaacaaaaaaaaa 502
Query: 303 actcctacttttactaaaagacataataaggatgaaccaagaaacaaataattaaagaag 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 actcctacttttactaaaagacataataaggatgaaccaagaaacaaataattaaagaag 562
Query: 363 gtatgtgttaacactagcctttatagagtgtttactggacaccttttcaagatgattctc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gtatgtgttaacactagcctttatagagtgtttactggacaccttttcaagatgattctc 622
Query: 423 atttaatccccatagcatttccaaaaggctggtagtactagctcatttataatttccaca 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 atttaatccccatagcatttccaaaaggctggtagtactagctcatttataatttccaca 682
Query: 483 taggtaactcaaggcttaaagataaggaaggctctgggtgcaagccatgtagctctaagt 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 683 taggtaactcaaggcttaaagataaggaaggctctgggtgcaagccatgtagctctaagt 742
Query: 543 aatatgaaaaatggtgctctagattttaatgaaagtcaaaatttgaagttcaaactttta 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 aatatgaaaaatggtgctctagattttaatgaaagtcaaaatttgaagttcaaactttta 802
Query: 603 gtgactattctatgatacttttattttaaagcatttttttta 644
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gtgactattctatgatacttttattttaaagcatttttttta 844
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no138_i20.g1 MSMg01no138_i20.g1 CHROMAT_FILE:
MSMg01no138_i20.g1 PHD_FILE: MSMg01no138_i20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:55:37 2005
(554 letters)
>mm_chr15_33484376_33485329
Length = 954
Score = 1033 bits (534), Expect = 0.0
Identities = 549/554 (99%)
Strand = Plus / Minus
Query: 1 agacatctacctaggctcctctccatttcctctcaaaccacagaaaaactgtagttctta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 754 agacatctacctaggctcctctccatttcctctcaaaccacagaaaaactgtagttctta 695
Query: 61 agacctgtaagtcactagtttttctcctctggaattcttaccatgcagtctctatcccat 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 694 agacctgtaagtcactagtttttgtcctctggaattcttaccatgcagtctctatcccat 635
Query: 121 cctgatttctctttgcactttacacttgctcttgtgctcatctttcatgaataattcctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 634 cctgatttctctttgcactttacacttgctcttgtgctcatctttcatgaataattcctt 575
Query: 181 tacaaatttaaaaagccaattgtcattatgctgtttgttttgtgtaaaccagattttcaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 574 cacaaatttaaaaagccaattgtcattatgctgtttgttttgtgtaaaccagattttcga 515
Query: 241 ggtagacattattttcttagtgtggatagcaaagaggtatagacataagttaactaatgg 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 514 ggtagacattatttccttagtgtggatagcaaagaggtatagacataagttaactaatgg 455
Query: 301 ccactgaaatggcatacagaaagccagtccaaagcacagtgccagtgagactaggaagca 360
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ccactgaaatagcatacagaaagccagtccaaagcacagtgccagtgagactaggaagca 395
Query: 361 ggtggtgtgggtaggaatacatactactatccagcctagaaacactgtctccactgatag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 394 ggtggtgtgggtaggaatacatactactatccagcctagaaacactgtctccactgatag 335
Query: 421 cacagcctaatcatgcatgaagaaaatcaatttatcttctactgaatgtcagatgaaggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 cacagcctaatcatgcatgaagaaaatcaatttatcttctactgaatgtcagatgaaggc 275
Query: 481 taagtcaagtagtgatctactctttggagaacaatgtgagcatagtataggaggttagta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 taagtcaagtagtgatctactctttggagaacaatgtgagcatagtataggaggttagta 215
Query: 541 aaatttccatggat 554
||||||||||||||
Sbjct: 214 aaatttccatggat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 554
Length of database: 954
Length adjustment: 10
Effective length of query: 544
Effective length of database: 944
Effective search space: 513536
Effective search space used: 513536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
