Query= MSMg01no139_m14.b1 MSMg01no139_m14.b1 CHROMAT_FILE:
MSMg01no139_m14.b1 PHD_FILE: MSMg01no139_m14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:17 2005
(327 letters)
>mm_chr15_68219157_68219883
Length = 727
Score = 569 bits (294), Expect = e-166
Identities = 318/326 (97%), Gaps = 2/326 (0%)
Strand = Plus / Plus
Query: 1 aacacaggggtggtacagtgatagctgccaaggtctgctgagctttttgacctgtctgaa 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacacgggggtggtacagtgatagctgccaaggtctgctgagctttttgacctgtctgaa 260
Query: 61 actccatcttggccttcacagccattagctcagtatggcaggaacacacttttgacttct 120
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 attccatcttggccttcacagccattagctcagtatggcaggaacacacttttgacttct 320
Query: 121 atagacaccctattaagtccttgactcatagtttatgagctgactttgctgcctgtaaaa 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagacaccctattaagtccctgactcatagtttatgagctgactttgctgcctgtaaaa 380
Query: 181 ggagggact-gaagaaacatttctaaactcttgggctcttggtttcttcatgactggtgg 239
||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggaggga-tagaagaaacatttctaaactcttgggctcttggtttcttcatgactggtgg 439
Query: 240 gatctgtagagctcgctctgcctcttgcactattgtgaagatcttaatctttagtttaat 299
| ||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 440 ggtctgtagagcttgctctgcctcttgcactattgtgaaaatcttaatctttagtttaat 499
Query: 300 ccattgtacagataatagaaagtgaa 325
||||||||||||||||||||||||||
Sbjct: 500 ccattgtacagataatagaaagtgaa 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 727
Length adjustment: 9
Effective length of query: 318
Effective length of database: 718
Effective search space: 228324
Effective search space used: 228324
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_m14.g1 MSMg01no139_m14.g1 CHROMAT_FILE:
MSMg01no139_m14.g1 PHD_FILE: MSMg01no139_m14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:17 2005
(498 letters)
>mm_chr15_68357065_68357962
Length = 898
Score = 866 bits (448), Expect = 0.0
Identities = 466/476 (97%), Gaps = 7/476 (1%)
Strand = Plus / Minus
Query: 30 atatctcaaaagaaactaaaaagattgattagccatcagtagagagtcagaatctctcag 89
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898 atatctcaaaagaaactaaaaagattgattagccatcagtagagagtcagaatctctcag 839
Query: 90 ctgaagtgaggtccagatagccggctcccttagtatttaacatcactgtgttgttaaccc 149
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 838 ctgaagtgaggtccagatagctggctcccttagtatttaacatcactgtgttgttaaccc 779
Query: 150 ctgtcagttctgtagtgcaaaatacaagggcagaaagtgatggggatagagaagggaggt 209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 ctgtcagttctgtagtgcaaaatacaagggcagaaagtgatggggatagagaagggaggt 719
Query: 210 agaaagctctttt-------ctccacactccacccaggttcttacagctgaagaagtggt 262
||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 718 agaaagctcttttctccacactccacactccacccaagttcttacagctgaagaagtggt 659
Query: 263 ctaacaactgcactagaaactttttcatgacctccgaagcatctagttttcccccttata 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 ctaacaactgcactagaaactttttcatgacctccgaagcatctagttttcccccttata 599
Query: 323 tttcttgacagtttctgagaagctaggttgccctacagatatggaagattaggctagcta 382
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 tttcttgacagtttctgagaagctaggttgccctacagatatggaagattaggctagcta 539
Query: 383 actcagtaaggacattccattgtcctaagtgagcatttcacctaagtcaggacagtttga 442
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 538 actcagtaaggacattccattgtcctaagtgagcctttcacctaagtcaggacagtttga 479
Query: 443 ctatgtgggttctcctcaaaagtctagataataacaatttagctttcatggagaat 498
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 ctatgtgggttctcctcaaaagtctagataataacaatttagctttcatggagaat 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 898
Length adjustment: 10
Effective length of query: 488
Effective length of database: 888
Effective search space: 433344
Effective search space used: 433344
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
