Query= MSMg01no139_n21.b1 MSMg01no139_n21.b1 CHROMAT_FILE:
MSMg01no139_n21.b1 PHD_FILE: MSMg01no139_n21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:24 2005
(655 letters)
>mm_chr15_53044652_53045707
Length = 1056
Score = 1212 bits (627), Expect = 0.0
Identities = 645/651 (99%), Gaps = 1/651 (0%)
Strand = Plus / Minus
Query: 6 gaattctttgtcctgctcattgggcaggggacttaataatatctttgtacggtcttctta 65
||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||
Sbjct: 856 gaattctttgtcctgcttattgggcaggtgacttaataatatctttgtacggtcttctta 797
Query: 66 agttattgaaactctctcttcactgtcctaaggaatggcagcaaccatgaatagacatca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 796 agttattgaaactctctcttcactgtcctaaggaatggcagcaaccatgaatagacatca 737
Query: 126 ataaatgtcaaatacaatgggtcctgttagcaacagcaatggtagcagctcattattgca 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 736 ataaatgtcaaatacaatgggtcctgttagcaacagcaatggtagcagctcattattgca 677
Query: 186 ggggatagtgggcctagttactacatgttcacctcttttggtttgtggagttatccacag 245
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 676 ggggatagtgggcctagttactacatgttcacctcttttggtttgtggagttacccacag 617
Query: 246 tttcataagcatttaacttttatccttggaatgtaactagttagatttaatcttacgttt 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 tttcataagcatttaacttttatccttggaatgtaactagttagatttaatcttacgttt 557
Query: 306 catatttctgttattttgtttttcccaattcttagccag-tttttttgtggttttcatct 364
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 556 gatatttctgttattttgtttttcccaattcttagccagttttttttgtggttttcatct 497
Query: 365 tgaacgtattctccgatgataactgaggtaaaattttgagagtgccgtttaaggaccccc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 tgaacgtattctccgatgataactgaggtaaaattttgagagtgccgtttaaggaccccc 437
Query: 425 tgtttaggacttttctttttaatttcatgactccttatggttctgtgtgagaggaaaggg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 tgtttaggacttttctttttaatttcatgactccttatggttctgtgtgagaggaaaggg 377
Query: 485 aatttgtttccttggccaccgttcaaaacaaagactaatgacacaaatgagcagaaacag 544
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 aatttatttccttggccaccgttcaaaacaaagactaatgacacaaatgagcagaaacag 317
Query: 545 tgactttgtgagtgacaggtggggcctagccacagctctcccttcctcagagttttcagg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 tgactttgtgagtgacaggtggggcctagccacagctctcccttcctcagagttttcagg 257
Query: 605 tacattctgggaaagttagctgaattcaaaagactcaccttggtggggtca 655
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tacattctgggaaagttagctgaattcaaaagactcaccttggtggggtca 206
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 655
Length of database: 1056
Length adjustment: 10
Effective length of query: 645
Effective length of database: 1046
Effective search space: 674670
Effective search space used: 674670
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no139_n21.g1 MSMg01no139_n21.g1 CHROMAT_FILE:
MSMg01no139_n21.g1 PHD_FILE: MSMg01no139_n21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:57:24 2005
(623 letters)
>mm_chr15_52922769_52923791
Length = 1023
Score = 1166 bits (603), Expect = 0.0
Identities = 615/619 (99%)
Strand = Plus / Plus
Query: 1 cacatggtcctcccaacaagtccggtttacattaaatggttattcactgctgatgaatac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacatggtcctcccaacaagtccggtttacattaaatggttattcactgctgatgaatac 260
Query: 61 tttaggcccgaaacttcagtctcacttcgtgggtttcaaactaagtatgtacaatttaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaggcccgaaacttcagtctcacttcgtgggtttcaaactaagtatgtacaatttaag 320
Query: 121 aagggtgaaggtgttttggagcacattcatatagaataggaccaccctgagtctttatca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagggtgaaggtgttttggagcacattcatatagaataggaccaccctgagtctttatca 380
Query: 181 tagcagtctgaaagataccttactgccccacattttctaaacgctgtaactctgagctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagcagtctgaaagataccttactgccccacattttctaaacgctgtaactctgagctaa 440
Query: 241 cgtgtcgctgatgccactgacgtgagagcgtctggggctccaactacggcaatgcctgcg 300
||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||
Sbjct: 441 cgtgtcgctgatgccactgacatgagagcgtctggggctccaactatggcaatgcctgcg 500
Query: 301 gtaggaacatcagcctgtgtggagctgtatctctgtgctcccatccttcaccccactgag 360
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtaggaacatcagcctctgtggagctgtatctctgtgctcccatccttcaccccactgag 560
Query: 361 atcaagtcaaagctgcttgtgagtacagattctaccaaaccttcaaacatctagcctggc 420
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 561 atcaagtcaaagctgcttgtgagtacagattctaccaaaccttcaaacatctagcctgcc 620
Query: 421 attagctctgtgtaggagagggccatactaaaccctggaagaatgcatcaattcttcctt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attagctctgtgtaggagagggccatactaaaccctggaagaatgcatcaattcttcctt 680
Query: 481 gacacatcatcttagttatttcttatttctccttcttaattcaggtttttctaaatgtac 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gacacatcatcttagttatttcttatttctccttcttaattcaggtttttctaaatgtac 740
Query: 541 ataaagagaagtgagattatgaaaaaaatcatggagatatacacacacgggcatacctat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ataaagagaagtgagattatgaaaaaaatcatggagatatacacacacgggcatacctat 800
Query: 601 atacatacacagacacaca 619
|||||||||||||||||||
Sbjct: 801 atacatacacagacacaca 819
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
