CATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXGCCTGGTCTACAAAGTGAGTTCCAGGAGAGCCAGGGCTACA
CAGAGAAACCCTGTCTCAAAAAAAACCAAAGGGGGGGGGGAGAAATCAGT
ATATGGAACCGACCAGAGAGATTGATAGCACATACTGCTCTTACAAAAGA
CCTCATTTCAGTTCCAAGAACCCACATAGGGAGATTCACATAAGTCCATA
ATTCCAATAACTCCAGCTCCAAGGGATCTAACACCTCTGTCTCTATAGGC
ACCTCCACTGGCGAATACCTACACACAGACACACCCAAGTACACACCATT
CAAAATAAGTCTTTAAAGAGAGAATTGACATATGTAATATGTCAATTATA
TATGACATATAAGCAAGCACATAGGTGATATGTTGTATTTAATATAGAAA
TAGTGATTTTAGCTTTATTTGTATGTAATTGATCTATCATTTCCAATAGT
ACATAGTCTAACTTAGGTGTTTTTAAATCATTATAGATTTGTGAGCATAG
GTCAGTGGTAGAGTGCCTGGGTTGCAAACACCCCATACACATACCCAGAG
ACAGACAAACACACACACATGCATAATACAGGCGCGCGGGTGCGCACACA
CACACACACCCCTATATACCTATATATTGCAAAAGTTTCTTAAATAGGTT
ACCAAAGCATCACTTA

NAAGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAATTAAGTAATTGGCAAGATTTCTGTG
GATGGTTGGGGGCAGAGCAGGACAAATAGTAAATATTTTCTCTTCATTAT
TTATTTGTGTTTTTTTCCATTGAAGCCTTGAGTAGTTTCAGGATACTTGA
GAATGACCATAAATAACTAAAAAGTTATATTAAAATATTTTTTTAAGAAG
ACTAAACTGAAGGGTCTCACACATGTTGTACCACTAACAGTAACAATGAC
CCCCTTAAATAACTTGAATTATTTTATTGGTGGTAGGTCTAAATACTTAA
GGTGAGATCTGATCATCTCATTTACTTGCCTATTTAAAGGTTTATTTATT
TTTATTTTCTGTGTATGAATGCTTTGCCCCCATATTTGTATGTATGTACA
TCTAGTTTGTGTATCCAAGGAGCCCAGAAGAGGGCATTAGGTCCCTGAAA
CTAGAGTTATAGGTGGTTGGAAGCTTCCATGTGGGTACTTAAAATTGAAC
CTGGGTCTTCTGGAAGAACAGCCAGTGCTCTTAACCACTGAGCTGTCTCT
CCAGCCTCAGTTTGACTACTTTAAATGACCCATTTAATCTAGTGTTTGGT
GGTTGTCCAAATTGCCCCCCCCCCCTTTTCCTTTTCCCCTTA

Query= MSMg01no143_j02.b1 MSMg01no143_j02.b1 CHROMAT_FILE:
MSMg01no143_j02.b1 PHD_FILE: MSMg01no143_j02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:09 2005
         (537 letters)



>mm_chr15_12342896_12343832
          Length = 937

 Score =  862 bits (446), Expect = 0.0
 Identities = 458/462 (99%)
 Strand = Plus / Minus

                                                                       
Query: 74  ggggggggagaaatcagtatatggaaccgaccagagagattgatagcacatactgctctt 133
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 937 ggggggggaggaatcagtatatggaaccgaccagagagattgatagcacatactgctctt 878

                                                                       
Query: 134 acaaaagacctcatttcagttccaagaacccacatagggagattcacataagtccataat 193
           ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||
Sbjct: 877 acaaaagacctcatttcagttccaagaacccacatagggagatttgcataagtccataat 818

                                                                       
Query: 194 tccaataactccagctccaagggatctaacacctctgtctctataggcacctccactggc 253
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 817 tccaataactccagctccaagggatctaacacctctgtctctataggcacctccactggt 758

                                                                       
Query: 254 gaatacctacacacagacacacccaagtacacaccattcaaaataagtctttaaagagag 313
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 gaatacctacacacagacacacccaagtacacaccattcaaaataagtctttaaagagag 698

                                                                       
Query: 314 aattgacatatgtaatatgtcaattatatatgacatataagcaagcacataggtgatatg 373
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 697 aattgacatatgtaatatgtcaattatatatgacatataagcaagcacataggtgatatg 638

                                                                       
Query: 374 ttgtatttaatatagaaatagtgattttagctttatttgtatgtaattgatctatcattt 433
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 ttgtatttaatatagaaatagtgattttagctttatttgtatgtaattgatctatcattt 578

                                                                       
Query: 434 ccaatagtacatagtctaacttaggtgtttttaaatcattatagatttgtgagcataggt 493
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 ccaatagtacatagtctaacttaggtgtttttaaatcattatagatttgtgagcataggt 518

                                                     
Query: 494 cagtggtagagtgcctgggttgcaaacaccccatacacatac 535
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 cagtggtagagtgcctgggttgcaaacaccccatacacatac 476


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space:   488529
Effective search space used:   488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no143_j02.g1 MSMg01no143_j02.g1 CHROMAT_FILE:
MSMg01no143_j02.g1 PHD_FILE: MSMg01no143_j02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:04:09 2005
         (456 letters)



>mm_chr15_12254684_12255539
          Length = 856

 Score =  851 bits (440), Expect = 0.0
 Identities = 452/456 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   caattaagtaattggcaagatttctgtggatggttgggggcagagcaggacaaatagtaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caattaagtaattggcaagatttctgtggatggttgggggcagagcaggacaaatagtaa 260

                                                                       
Query: 61  atattttctcttcattatttatttgtgtttttttccattgaagccttgagtagtttcagg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atattttctcttcattatttatttgtgtttttttccattgaagccttgagtagtttcagg 320

                                                                       
Query: 121 atacttgagaatgaccataaataactaaaaagttatattaaaatatttttttaagaagac 180
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 atacttgagaatgaccataaataaccaaaaagttatattaaaatatttttttaagaagac 380

                                                                       
Query: 181 taaactgaagggtctcacacatgttgtaccactaacagtaacaatgacccccttaaataa 240
           |||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||
Sbjct: 381 taaactgaagggtctcacacatattgtaccactaactgtaacaatgacccccttaaataa 440

                                                                       
Query: 241 cttgaattattttattggtggtaggtctaaatacttaaggtgagatctgatcatctcatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cttgaattattttattggtggtaggtctaaatacttaaggtgagatctgatcatctcatt 500

                                                                       
Query: 301 tacttgcctatttaaaggtttatttatttttattttctgtgtatgaatgctttgccccca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tacttgcctatttaaaggtttatttatttttattttctgtgtatgaatgctttgccccca 560

                                                                       
Query: 361 tatttgtatgtatgtacatctagtttgtgtatccaaggagcccagaagagggcattaggt 420
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 561 tatttgtatgtatgtacatctagtttgtgtatccaaggaggccagaagagggcattaggt 620

                                               
Query: 421 ccctgaaactagagttataggtggttggaagcttcc 456
           ||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccctgaaactagagttataggtggttggaagcttcc 656


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space:   377316
Effective search space used:   377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)