Query= MSMg01no145_n17.b1 MSMg01no145_n17.b1 CHROMAT_FILE:
MSMg01no145_n17.b1 PHD_FILE: MSMg01no145_n17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:04 2005
(642 letters)
>mm_chr15_47922917_47923958
Length = 1042
Score = 1212 bits (627), Expect = 0.0
Identities = 636/639 (99%)
Strand = Plus / Minus
Query: 4 gaattcttgtgtgatgacatgcctgcaattagattaattaggttagattaactagattag 63
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 gaattcttgtgtgatgaaatgcctgcaattagattaattaggttagattaactagattag 848
Query: 64 gttagtggggataggtaaaacttttttcttaatcagattttcaatgaagtttcctataaa 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 847 gttagtggggataggtaaaacttttttcttaatcagattttcaatgaagtttcctataaa 788
Query: 124 ggtaacaaggtgtatataattcttctactctaatatgaagcatttaagttcttcacactt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 ggtaacaaggtgtatataattcttctactctaatatgaagcatttaagttcttcacactt 728
Query: 184 atatttgtgagtggaatttttgtgtttcttatgcttatgcatttatttttttctagatgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 atatttgtgagtggaatttttgtgtttcttatgcttatgcatttatttttttctagatgc 668
Query: 244 aggcctagtgcattttggacataacttcatgcatgtgtgtatgacagactattcatctcc 303
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 aagcctagtgcattttggacataacttcatgcatgtgtgtatgacagactattcatctcc 608
Query: 304 ttgtctgaatgagatagaaaatacaaaatttctttcaactacagtaactgtgaaataacc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 ttgtctgaatgagatagaaaatacaaaatttctttcaactacagtaactgtgaaataacc 548
Query: 364 agacactcaaagtactgtacttctcaataatggtcgcaatagaataattgtagtcattct 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 agacactcaaagtactgtacttctcaataatggtcgcaatagaataattgtagtcattct 488
Query: 424 agagtttcccttgggttaaaggactccttctagatttatgaacgttttgtagttactatt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 agagtttcccttgggttaaaggactccttctagatttatgaacgttttgtagttactatt 428
Query: 484 cacctttatttcctcccccaaatctccagaaactctttaaagacaaataagggaatacaa 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cacctttatttcctcccccaaatctccagaaactctttaaagacaaataagggaatacaa 368
Query: 544 tgaacacttactctcttatcaatcataattttctttgtttaccttttcaataaaatcctt 603
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 367 tgaacacttactctcttatcaatcataattttctttgtttaccttctcaataaaatcctt 308
Query: 604 gcaaaaggtgctcagataaaacccaggataagttcttag 642
|||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gcaaaaggtgctcagataaaacccaggataagttcttag 269
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 642
Length of database: 1042
Length adjustment: 10
Effective length of query: 632
Effective length of database: 1032
Effective search space: 652224
Effective search space used: 652224
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_n17.g1 MSMg01no145_n17.g1 CHROMAT_FILE:
MSMg01no145_n17.g1 PHD_FILE: MSMg01no145_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:04 2005
(624 letters)
>mm_chr15_47758537_47759560
Length = 1024
Score = 1174 bits (607), Expect = 0.0
Identities = 621/627 (99%), Gaps = 3/627 (0%)
Strand = Plus / Plus
Query: 1 tggattctgaggcagtgttataggcatataactacaatccctagaaatagttgtcttgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 tggattctgaggcagtgttataggcatataactacaatccctagaaatagttgtcttgtt 257
Query: 61 atatgcaaagtgcaaaaaaa---gggaaataaaaataacattattctttcacattaatta 117
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 258 atatgcaaagtgcaaaaaaaaaagggaaataaaaataacattattctttcacattaatta 317
Query: 118 tgtctgcaaaaattatatgaattaactatcttatttcactgacaatctctggaatcgagt 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 tgtctgcaaaaattatatgaattaactatcttatttcactgacaatctctggaatcgagt 377
Query: 178 aaggaaaatcccattatctaattatggaatttgtaaagcagaaatgtccatgtattgtgg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 aaggaaaatcccattatctaattatggaatttgtaaagcagaaatgtccatgtattgtgg 437
Query: 238 tcatgaagcttgtagtagtctttaaatggtaatgtgtgcttgcttcacatttattaacta 297
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 tcatgaaacttgtagtagtctttaaatggtaatgtgtgcttgcttcacatttattaacta 497
Query: 298 gagacaatataatacagtagtggagaatgacactaaagtcataatagcaagtttctcatt 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 gagacaatataatacagtagtggagaatgacactaaagtcataatagcaagtttctcatt 557
Query: 358 tgggctctatggaaacttgatcaaatttctaaacattatatatcaggtttattagaaata 417
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 tgggctctatggaaacttgatcaaatttctaaacattatatatcaggtttattagaaata 617
Query: 418 ttattttttaaaaaattgcgaaattaaattcattagcatgtataactgccttacaagaga 477
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 618 ttatttttttaaaaattgcgaaattaaattcattagcatgtataactgccttacaagaga 677
Query: 478 atacgcaaatgatgagtactcaaaatatgatactatttcagttcattggcatctaaaata 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 atacgcaaatgatgagtactcaaaatatgatactatttcagttcattggcatctaaaata 737
Query: 538 gatatagatattttcaaaagtaattttattagaaagatagaaatgcttattaatggcatt 597
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 738 gatatagatattttcaaaagtaattttattagaaagatagaaatgctcattaatggcatt 797
Query: 598 aacatacaaaatgccagtgttaaatat 624
|||||||||||||||||||||||||||
Sbjct: 798 aacatacaaaatgccagtgttaaatat 824
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 624
Length of database: 1024
Length adjustment: 10
Effective length of query: 614
Effective length of database: 1014
Effective search space: 622596
Effective search space used: 622596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
