Query= MSMg01no145_o19.b1 MSMg01no145_o19.b1 CHROMAT_FILE:
MSMg01no145_o19.b1 PHD_FILE: MSMg01no145_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:09 2005
(371 letters)
>mm_chr15_32352159_32352929
Length = 771
Score = 658 bits (340), Expect = 0.0
Identities = 361/368 (98%)
Strand = Plus / Minus
Query: 4 ggaattctggcaatgtgcccgggtattttagtcaccactgcacattcaaagataaatctt 63
||||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 ggaattctggcaatgggtcagggtattttagtcaccactgcacattcaaagataaatctt 512
Query: 64 ccagagcatacagccaaggcggcagcctgcagacacagcaagctgccagagcttgtgaga 123
|||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 511 ccagagcatacagccaaggcggcagccttcagacacagcaagctgccagcgcttgtgaga 452
Query: 124 caaagcgctcagtgagaatggaggagcccacagaggcaagtacttcactgaggctgggga 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 caaagcgctcagtgagaatggaggagcccacagaggcaagtacttcactgaggctgggga 392
Query: 184 gcaagactgccagaatcttcagcccagccaggtaggcccaatcatgacacagacaaactg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gcaagactgccagaatcttcagcccagccaggtaggcccaatcatgacacagacaaactg 332
Query: 244 tgctgcatggcattaaggtgttggctttggcatacgagtcacttcattcacaacctctta 303
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tgctgcatggcattaaagtgttggctttggcatacgagtcacttcattcacaacctctta 272
Query: 304 tacagaatgctgccacagcggaacagtaaaccatgatgtttaaaagcatgtggaaatcaa 363
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 271 tacagaatgctgccacagcggaacagtaaaccatgatgtttaaaagcaagtggaaatcaa 212
Query: 364 gattttaa 371
||||||||
Sbjct: 211 gattttaa 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no145_o19.g1 MSMg01no145_o19.g1 CHROMAT_FILE:
MSMg01no145_o19.g1 PHD_FILE: MSMg01no145_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:07:09 2005
(452 letters)
>mm_chr15_32238047_32238897
Length = 851
Score = 746 bits (386), Expect = 0.0
Identities = 439/464 (94%), Gaps = 13/464 (2%)
Strand = Plus / Plus
Query: 1 tctgcttctgtgacatcggcttacttagcttccatgtgtgagtgagatcctgtgagattt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 tctgcttctgtgacatcggcttacttagcttccatgtgtgagtgagatcctgtgagattt 248
Query: 61 ctctttcagtacctggttatcgcttcacatgtgctcttccaaatccatccacatttctga 120
||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||
Sbjct: 249 ctctttcagtacctggttatcgctttacatgtgctcttccaaatctatccacatttctga 308
Query: 121 ccttatatgattccatttttcatggctgaacaggaaactgtatatcacatacatacacac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 ccttatatgattccatttttcatggctgaacaggaaactgtatatcacatacatacacac 368
Query: 181 acacatacagacacacacacacacacacacacacacacacac------------ttgatc 228
|||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 369 acacatacagacacacacacacacacacacacacacacacacacacacacacacttgatc 428
Query: 229 gtcagatttgatttacttctgtgccttttgatatatagaaatgtgtgtctcaaaggctta 288
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 429 -tcagatttgatttacttctgtgccttttgacatatagaaatgtgtgtctcaaaggctta 487
Query: 289 ggcaagcgaaggaaaagtactgtctggaatcgtgatggcctccttttcagctcaccccca 348
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 488 ggcaagcgaaggaaaagtactgtctggaatcgtgatggcctccttttcagctcatgctga 547
Query: 349 cccgccttgtcgttacctctttctggactttctttccaccatatttcacttggctttggt 408
||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct: 548 agtgccttgtcgttacctctttctggactttccttccaccatacttcacttggctttggt 607
Query: 409 atgtagtatgaattctttatgggcattccccaccttctttgtgc 452
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 atgtagtatgaattctttatgggcattccccaccttctttgtgc 651
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 46
Number of extensions: 13
Number of successful extensions: 13
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 851
Length adjustment: 10
Effective length of query: 442
Effective length of database: 841
Effective search space: 371722
Effective search space used: 371722
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
