Query= MSMg01no147_a21.b1 MSMg01no147_a21.b1 CHROMAT_FILE:
MSMg01no147_a21.b1 PHD_FILE: MSMg01no147_a21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:32 2005
(617 letters)
>mm_chr15_7269256_7270272
Length = 1017
Score = 1145 bits (592), Expect = 0.0
Identities = 607/612 (99%), Gaps = 1/612 (0%)
Strand = Plus / Minus
Query: 7 gaattctatgcc-tatttaaaagaaaagcgcacatgggcacactaggaagggaatcaaga 65
|||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 829 gaattctatgccataattaaaagaaaagcgcacatgggcacactaggaagggaatcaaga 770
Query: 66 cagagtcttgctaagtagccttgactggtctggagctggctatgtagaccaggctggcct 125
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 769 cagagtcttgctaagtagccttgattggtctggagctggctatgtagaccaggctggcct 710
Query: 126 tgaactcacagacatccatctgcctcccctttctccccacaaccagcaaggaaatcaaat 185
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 709 tgaactcacagacatccatctgcctcccctttctccccacagccagcaaggaaatcaaat 650
Query: 186 ttttgagcgttcattctgtcaagggatgtttgctgagctctgaccatttcctagtctgta 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ttttgagcgttcattctgtcaagggatgtttgctgagctctgaccatttcctagtctgta 590
Query: 246 tgctggacaggacagaactgatttctgccctcctggaatgttatttaaaatagtgaatta 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tgctggacaggacagaactgatttctgccctcctggaatgttatttaaaatagtgaatta 530
Query: 306 tgggaaataaaagtgtctaacaatggtggaataacaaatactgtttattgtggaaataag 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 529 tgggaaataaaagtgtctaacaatggtggaataacaaatactgtttattgtggaaatgag 470
Query: 366 catgctatggaagcatttacagtcattagagctaattattttaatgatggaaaattaagt 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 catgctatggaagcatttacagtcattagagctaattattttaatgatggaaaattaagt 410
Query: 426 aaaataaactgtaagattatgagcatgtacacatatacacataatcactaaattataaat 485
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aaaataaactgtaagattatgagcatgtacacatatacacataatcactaaattataaat 350
Query: 486 gaaattatatttaactaaaattatatgtatcatgaacatacagaataatttttaattgta 545
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gaaattatatttaactaaaattatatgtatcatgaacatacagaataatttttaattgta 290
Query: 546 tttgaacaaaagaaggtcctactaaaatgctaataggactcgtttctgaataataagatt 605
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tttgaacaaaagaaggtcctactaaaatgctaataggactcgtttctgaataataagatt 230
Query: 606 gtgggcctgtgt 617
||||||||||||
Sbjct: 229 gtgggcctgtgt 218
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 617
Length of database: 1017
Length adjustment: 10
Effective length of query: 607
Effective length of database: 1007
Effective search space: 611249
Effective search space used: 611249
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no147_a21.g1 MSMg01no147_a21.g1 CHROMAT_FILE:
MSMg01no147_a21.g1 PHD_FILE: MSMg01no147_a21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:09:32 2005
(443 letters)
>mm_chr15_7121331_7122173
Length = 843
Score = 833 bits (431), Expect = 0.0
Identities = 440/443 (99%)
Strand = Plus / Plus
Query: 1 ttttctaagttaatttctttgcaaagggaatcggtacattttgaacattctcctctcgtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttctaagttaatttctttgcaaagggaatcggtacattttgaacattctcctctcgtt 260
Query: 61 tccttttctcttgtcacactcctgtttctttttaattcattcttattatttggactttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tccttttctcttgtcacactcctgtttctttttaattcattcttattatttggactttga 320
Query: 121 atagacgaatgtgtatattctataccctaaagttatcatcactgtaaattattctaagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atagacgaatgtgtatattctataccctaaagttatcatcactgtaaattattctaagtt 380
Query: 181 ccagcatgtcataagagtggtagataattttgtcttgagttttaaaataactttcaaaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccagcatgtcataagagtggtagataattttgtcttgagttttaaaataactttcaaaat 440
Query: 241 aagcgtatcaatgtttaattaattgtccaatagtaagactgccaaacattcccttgccat 300
||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||
Sbjct: 441 aagcgtatcaatgtttaattaattgtccaatagcaagactgccaaacattccctcgccat 500
Query: 301 cctcggtgtcagctaaaatgctagcagaggagcctgggagacgtcagtgagtaagacact 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctcggtgtcagctaaaatgctagcagaggagcctgggagacgtcagtgagtaagacact 560
Query: 361 tgctgcgcagtcccatggcctgagtgtggtccttggaactcactcccataaagacagaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgctgcgcagtcccatggcctgagtgtggtccttggaactcactcccataaagacagaag 620
Query: 421 gaaagaggcagcaggagagagag 443
|| ||||||||||||||||||||
Sbjct: 621 gagagaggcagcaggagagagag 643
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
