Query= MSMg01no148_f11.b1 MSMg01no148_f11.b1 CHROMAT_FILE:
MSMg01no148_f11.b1 PHD_FILE: MSMg01no148_f11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:12 2005
(626 letters)
>mm_chr15_7357308_7358334
Length = 1027
Score = 1027 bits (531), Expect = 0.0
Identities = 590/623 (94%), Gaps = 23/623 (3%)
Strand = Plus / Plus
Query: 5 gaattctcttagatgtcgccttctttaagaaa-tgaaatctatataaaagattcatttgg 63
||||||||||||| || ||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 205 gaattctcttagaagtagccttctttaagaaatttaaatctatataaaagattcatttgg 264
Query: 64 gaaatgactgagattcttttcatgcttaaaacaaaacaagcaaacaaacaaaaacaacag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaaatgactgagattcttttcatgcttaaaacaaaacaagcaaacaaacaaaaacaacag 324
Query: 124 caacaacgtggtgatttcccaagtattttagtttgaaaagggaaacttgtcaagaatatt 183
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 caacaacatggtgatttcccaagtattttagtttgaaaagggaaacttgtcaagaatatt 384
Query: 184 caagctagccatttcagcctgtatgtgttaaaatataaatacaaatattgaactgaaaat 243
|||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 caagttagccatttcagcttgtatgtgttaaaatataaatacaaatattgaactgaaaat 444
Query: 244 ataagctactttaaaaaagtagactatgtctattaaaactggtatccaagtggaattcaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ataagctactttaaaaaagtagactatgtctattaaaactggtatccaagtggaattcaa 504
Query: 304 atattatattaatgggggaaaatgatcatgcttaccaaaaagcatgcttttaaaaaattc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atattatattaatgggggaaaatgatcatgcttaccaaaaagcatgcttttaaaaaattc 564
Query: 364 cccattttccgctcaaattttcctaagaaaccaaactgtatggtcataatagaaaacagt 423
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cccattttctgctcaaattttcctaagaaaccaaactgtatggtcataatagaaaacagt 624
Query: 424 catgatgtcttaacactcccatgttcctgcagtagcattcgcagacatgctgtgaaacaa 483
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 625 catgatgtcttaacactcccatgttcctgcagtagcattcacagacatgctgtgaaacaa 684
Query: 484 tctaaattctctgaacagatgggggaagatgcgtgctctgtctctctctctctctctctc 543
||||||||| |||||||||||||||||||||| ||| | |
Sbjct: 685 tctaaattccctgaacagatgggggaagatgcatgc---g-------------------c 722
Query: 544 tctctctctctctctctctctctgtatctctgtctctgtctgtctctatctcttggcctc 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 tctctctctctctctctctctctgtatctctgtctctgtctgtctctatctcttggcctc 782
Query: 604 tgtctctgtgtgtatctctgtct 626
|||||||||||||||||||||||
Sbjct: 783 tgtctctgtgtgtatctctgtct 805
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1027
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1017
Effective search space: 626472
Effective search space used: 626472
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_f11.g1 MSMg01no148_f11.g1 CHROMAT_FILE:
MSMg01no148_f11.g1 PHD_FILE: MSMg01no148_f11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:12 2005
(626 letters)
>mm_chr15_7505932_7506957
Length = 1026
Score = 886 bits (458), Expect = 0.0
Identities = 464/466 (99%)
Strand = Plus / Minus
Query: 1 atgcattcccaaattcagagcattttcctatagttgctatcttatctctctgccctatca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 atgcattcccaaattcagagcattttcctatagttgctatcttatctctctgccctatca 407
Query: 61 ccctcatctccaaccttcaaaagtagaggctacaaacagcctactacacatttctggggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 406 ccctcatctccaaccttcaaaagtagaggctacaaacagcctactacacatttctggggc 347
Query: 121 caaaaggccatggacaggaggagcaggtctggagcaagagtgagatggagatgtggctaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 caaaaggccatggacaggaggagcaggtctggagcaagagtgagatggagatgtggctaa 287
Query: 181 accctggaaatatcaccttgagaccagcaggagtgggactgcttctttgttgctctgggc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 286 accctggaaatatcaccttgagaccagcaggagtgggactgcttctttgttgctctgggc 227
Query: 241 ctgcatgtagagcacagatagccttacaaccctcacctttgcctccctgaggtagtcaca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 226 ctgcatgtagagcacagatagccttacaaccctcacctttgcctccctgaggtagtcaca 167
Query: 301 tagcctgctgggtaggttacagattaaactctctctctctccctacaaggacatgtccag 360
|||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 166 tagcctgctgggtaggttacagattaaactctctctctctccttataaggacatgtccag 107
Query: 361 caagcacctggaattcctcttcatgcaaatgaatcattcccaggacctctgcaccagcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 106 caagcacctggaattcctcttcatgcaaatgaatcattcccaggacctctgcaccagcca 47
Query: 421 atgatatatgctcaccctccaaaccccttcctactcaccaaggttt 466
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 46 atgatatatgctcaccctccaaaccccttcctactcaccaaggttt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 626
Length of database: 1026
Length adjustment: 10
Effective length of query: 616
Effective length of database: 1016
Effective search space: 625856
Effective search space used: 625856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
