Query= MSMg01no148_j12.b1 MSMg01no148_j12.b1 CHROMAT_FILE:
MSMg01no148_j12.b1 PHD_FILE: MSMg01no148_j12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:32 2005
(371 letters)
>mm_chr15_103079353_103080123
Length = 771
Score = 634 bits (328), Expect = 0.0
Identities = 334/336 (99%)
Strand = Plus / Minus
Query: 36 ctccgagatttggctgcctctgcatccagagtactgagattaaaggtgtgccaccatacc 95
||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 771 ctccgagatctggctgcctctgcatccagggtactgagattaaaggtgtgccaccatacc 712
Query: 96 cagtttctttctttccttttcccagacagagtttctctatatagtcctggagtttacttt 155
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 cagtttctttctttccttttcccagacagagtttctctatatagtcctggagtttacttt 652
Query: 156 atggtgcaggctaccctagaacgcagagattggatttgtcttttagatgctgggattaaa 215
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 atggtgcaggctaccctagaacgcagagattggatttgtcttttagatgctgggattaaa 592
Query: 216 ggtgtttaccaccactgcccaacatagtcgatcttcttaatcctctttatttttttcttt 275
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 ggtgtttaccaccactgcccaacatagtcgatcttcttaatcctctttatttttttcttt 532
Query: 276 gcagggtctaaatgttccaagtgagacatcttttgagcctcaagcacccaccccataccc 335
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 gcagggtctaaatgttccaagtgagacatcttttgagcctcaagcacccaccccataccc 472
Query: 336 tgggccactgccacctccaacatattgcccctgttc 371
||||||||||||||||||||||||||||||||||||
Sbjct: 471 tgggccactgccacctccaacatattgcccctgttc 436
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_j12.g1 MSMg01no148_j12.g1 CHROMAT_FILE:
MSMg01no148_j12.g1 PHD_FILE: MSMg01no148_j12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:32 2005
(345 letters)
>mm_chr15_102952702_102953446
Length = 745
Score = 640 bits (331), Expect = 0.0
Identities = 340/345 (98%), Gaps = 4/345 (1%)
Strand = Plus / Plus
Query: 5 tgggaggattaccgaccacagcaactggttccagcatccttggtccaagtcccccaccac 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgggaggattaccgaccacagcaactggttccagcatccttggtccaagtcccccaccac 260
Query: 65 acattcacacacaagccagccaccagctgttcctctgttctctaccctccccctccatca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acattcacacacaagccagccaccagctgttcctctgttctctaccctccccctccatca 320
Query: 125 ttgccagaatacccattccttggcagattccagtcacacacacacacacacacacacaca 184
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 321 ttgccagaatacccattccttggcagattccagccacacacacacacacacacacacaca 380
Query: 185 cacacacacacacac----caatagacagactctttcacagcatccttgtaagagcctct 240
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cacacacacacacacacaccaatagacagactctttcacagcatccttgtaagagcctct 440
Query: 241 gtctgcccagtctggtcagtctaccttctctcctcccctagagttcccccagcccctgac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtctgcccagtctggtcagtctaccttctctcctcccctagagttcccccagcccctgac 500
Query: 301 ttctccttccctttaacatggccctggaatctctatgcaagaccc 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctccttccctttaacatggccctggaatctctatgcaagaccc 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 51
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
