Query= MSMg01no148_k01.b1 MSMg01no148_k01.b1 CHROMAT_FILE:
MSMg01no148_k01.b1 PHD_FILE: MSMg01no148_k01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:35 2005
(519 letters)
>mm_chr15_13666914_13667832
Length = 919
Score = 928 bits (480), Expect = 0.0
Identities = 504/512 (98%), Gaps = 1/512 (0%)
Strand = Plus / Minus
Query: 5 gaattcataaaaggcttgcaccagaatcacactttcaaaaacataatataaaataaatta 64
||||||||||||||| | | |||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gaattcataaaaggcaag-agcagaatcacactttcaaaaacataatataaaataaatta 471
Query: 65 tatgaaccatagtttttaagaaatataaattgtatacacatataggaatagatgtacaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tatgaaccatagtttttaagaaatataaattgtatacacatataggaatagatgtacaag 411
Query: 125 atcacttataagaaaaatagaaatcaaaaacagatctgtagtctgtgaaaatggatcagt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 atcacttataagaaaaatagaaatcaaaaacagatctgtagtctgtgaaaatggatcagt 351
Query: 185 caggaaggatgtttgtcttttaagcacacagacttgaattctatcatgaaaacataaagt 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 caggaaggatgtttgtcttttaagcacacagacttgaattctatcatgaaaacataaagt 291
Query: 245 aatcaggtttgtatcaaacaggaggctaaccagcctatttgacttggtaatgtctaggcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 aatcaggtttgtatcaaacaggaggctaaccagcctatttgacttggtaatgtctaggcc 231
Query: 305 agtgaatgtccccatctaaacaacaagagcaacaacaataaaaaacaggggactgtggtt 364
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 230 agtgaatgtccccatctaaacaacaagagcaacaacaataaaaagcaggggactgtggtt 171
Query: 365 gaaaataacaccctagcttttattctggcttccacacacagaatctacacagacacacag 424
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 170 gaaaataacaccctagtttttattctggcttccacacacagaatctacacagacacacag 111
Query: 425 atacacacacatacataagggagagagacacatacatagacacacacagacacacaggca 484
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 110 atacacacacatacataggggagagagacacatacatagacacacacagacacacaggca 51
Query: 485 cacacaggcacacacatacattcacttcatag 516
|||||||||||||||| |||||||||||||||
Sbjct: 50 cacacaggcacacacacacattcacttcatag 19
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 519
Length of database: 919
Length adjustment: 10
Effective length of query: 509
Effective length of database: 909
Effective search space: 462681
Effective search space used: 462681
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no148_k01.g1 MSMg01no148_k01.g1 CHROMAT_FILE:
MSMg01no148_k01.g1 PHD_FILE: MSMg01no148_k01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:11:35 2005
(541 letters)
>mm_chr15_13492722_13493662
Length = 941
Score = 1038 bits (537), Expect = 0.0
Identities = 540/541 (99%)
Strand = Plus / Plus
Query: 1 tcattgcttaggaaatgtggagctagcctgaactttgaaagtgggtatagatgtttattc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcattgcttaggaaatgtggagctagcctgaactttgaaagtgggtatagatgtttattc 260
Query: 61 ctggtacttggcttgagatttaaatacaaaaagttgtttttaactagtatcaaactggat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctggtacttggcttgagatttaaatacaaaaagttgtttttaactagtatcaaactggat 320
Query: 121 tcataagaggacagaaacgaaactgattttgtctgtcattgcctttggggcagggaacag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcataagaggacagaaacgaaactgattttgtctgtcattgcctttggggcagggaacag 380
Query: 181 tgtttttcatctccagttgagatgatctccacgcacgtcttgttggctgaagcaccgatg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgtttttcatctccagttgagatgatctccacgcacgtcttgttggctgaagcaccgatg 440
Query: 241 tgttgtggaggattcttgactattctttgtaagaacaagctatgcaacatcccacagggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgttgtggaggattcttgactattctttgtaagaacaagctatgcaacatcccacagggg 500
Query: 301 agttccaatcagccttgcatttttctgatagtttccatatactccagcatcatctttcac 360
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 agttccaatcagccttgcatttttctgatagtttccatatactccagtatcatctttcac 560
Query: 361 ttttaacacccaacattcatgatgtgataccaagaatgagaagctatgtgttgctgttta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttttaacacccaacattcatgatgtgataccaagaatgagaagctatgtgttgctgttta 620
Query: 421 atatttaaattataaaatggagaaggtatatggactactcagtgcatgtaatttcctagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atatttaaattataaaatggagaaggtatatggactactcagtgcatgtaatttcctagt 680
Query: 481 aatttgaagccttgaaaacaatgatctattgtattaaaatagaatttcctaaaaattcta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 aatttgaagccttgaaaacaatgatctattgtattaaaatagaatttcctaaaaattcta 740
Query: 541 t 541
|
Sbjct: 741 t 741
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 541
Length of database: 941
Length adjustment: 10
Effective length of query: 531
Effective length of database: 931
Effective search space: 494361
Effective search space used: 494361
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
