Query= MSMg01no149_n18.b1 MSMg01no149_n18.b1 CHROMAT_FILE:
MSMg01no149_n18.b1 PHD_FILE: MSMg01no149_n18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:16 2005
(471 letters)
>mm_chr15_102183024_102183894
Length = 871
Score = 888 bits (459), Expect = 0.0
Identities = 465/467 (99%)
Strand = Plus / Plus
Query: 5 gaattcagagctatcccggtctaacataggaagctacaggccagtcagggatatatagtg 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagagctatcctggtctaacataggaagctacaggccagtcagggatatatagtg 264
Query: 65 agatggtgtctcaaaaacaaacaaacaagcacaaaccacactatgtctagagacacaaat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agatggtgtctcaaaaacaaacaaacaagcacaaaccacactatgtctagagacacaaat 324
Query: 125 tcagggacatcctctgaagcatagttcacactatgtctcagctacataagatcttgtctt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tcagggacatcctctgaagcatagttcacactatgtctcagctacataagatcttgtctt 384
Query: 185 taaaaagaaatgtggaagatggacctaaaactggagcgtaaagaatgggaggtgtggcaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaaaagaaatgtggaagatggacctaaaactggagcgtaaagaatgggaggtgtggcaa 444
Query: 245 ttatgcacttgattaattttagttttgtatttttgagacaggctgagggtgacttctaat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttatgcacttgattaattttagttttgtatttttgagacaggctgagggtgacttctaat 504
Query: 305 ttgccggaatcctcctgcctcatctcctgagtgctgagaattacaaacagtggtgaatag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttgccggaatcctcctgcctcatctcctgagtgctgagaattacaaacagtggtgaatag 564
Query: 365 ttaacctccattgtcattcatctggtacacagcgaacctgagagactaggcctgtctgaa 424
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ttaacctcgattgtcattcatctggtacacagcgaacctgagagactaggcctgtctgaa 624
Query: 425 aaaaagaaaaaagaaaagaaagggaaagagagagagagagagagaga 471
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aaaaagaaaaaagaaaagaaagggaaagagagagagagagagagaga 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no149_n18.g1 MSMg01no149_n18.g1 CHROMAT_FILE:
MSMg01no149_n18.g1 PHD_FILE: MSMg01no149_n18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:13:16 2005
(640 letters)
>mm_chr15_102267595_102268632
Length = 1038
Score = 673 bits (348), Expect = 0.0
Identities = 355/358 (99%), Gaps = 2/358 (0%)
Strand = Plus / Minus
Query: 283 tcaaactcctaggtagtcctaattctccttccaaagtgctgggattaaaggtgtgtgcca 342
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 1038 tcaaactcctaggtagtcctaattctccttccaaaatgctgggattaaaggtgtgtgcca 979
Query: 343 agccaggcagtggtggcgcatgcctttaatgccagcacttgggtggaaaaggcaggcaga 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 978 agccaggcagtggtggcgcatgcctttaatgccagcacttgggtggaaaaggcaggcaga 919
Query: 403 tttctgagttcgaggccagcctggtctacagagcaaattccaggacagccaggggcaaca 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 tttctgagttcgaggccagcctggtctacagagcaaattccaggacagccaggggcaaca 859
Query: 463 ccctgtctaggaaaacaaaacaaaacaaacaaacaaaaaaaaaaattgaaggtgtgtgcc 522
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 858 ccctgtctaggaaaacaaaacaaaacaaacaaac--aaaaaaaaattgaaggtgtgtgcc 801
Query: 523 atcatgtttgtgtgtctcagaacaaggtggaagacaaatcaatctaatacccaaagtcct 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 atcatgtttgtgtgtctcagaacaaggtggaagacaaatcaatctaatacccaaagtcct 741
Query: 583 cttcaatgtgtactgtgacacatgcacacacctgcattcacatgcagtcatttacatg 640
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 cttcaatgtgtactgtgacacatgcacacacctgcattcacatgcagtcatttacatg 683
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1038
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1028
Effective search space: 647640
Effective search space used: 647640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
