Query= MSMg01no153_m08.b1 MSMg01no153_m08.b1 CHROMAT_FILE:
MSMg01no153_m08.b1 PHD_FILE: MSMg01no153_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:13 2005
(665 letters)
>mm_chr15_14895528_14896593
Length = 1066
Score = 1241 bits (642), Expect = 0.0
Identities = 657/662 (99%), Gaps = 1/662 (0%)
Strand = Plus / Plus
Query: 4 ggaattcccttttat-tgcattatctgtctagaataacccctgtgttatttgaatttcta 62
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccttttacatgtattatctgtctagaataacccctgtgttatttgaatttcta 263
Query: 63 tactccagttgttgatagtcaaaatatcaaatgaaattttaaaggaaaatgtagaataac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tactccagttgttgatagtcaaaatatcaaatgaaattttaaaggaaaatgtagaataac 323
Query: 123 ttatctagaaatgaaatttcttttcacatgcagtcaattttgggaatgattgacagtgga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttatctagaaatgaaatttcttttcacatgcagtcaattttgggaatgattgacagtgga 383
Query: 183 ttcactccttttatgaacctgatatgtatatgttcaattaaataatccagtctaagagtg 242
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 384 ttcactccttttatgaacctgatatgtatatgttcagttaaataatccagtctaagagtg 443
Query: 243 attagtagttcatggtcctctattttatgaatttaaagcaaacaaggcaaaatatattag 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 attagtagttcatggtcctctattttatgaatttaaagcaaacaaggcaaaatatattag 503
Query: 303 gtctgatgtcaagcagaaagtagaatatgtaagtacaaaacatttggggaatgagagaca 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtctgatgtcaagcagaaagtagaatatgtaagtacaaaacatttggggaatgagagaca 563
Query: 363 gtatttaaaggatgctgtttctttctcttaaaatataagtatatttggttcacttattat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtatttaaaggatgctgtttctttctcttaaaatataagtatatttggttcacttattat 623
Query: 423 gaacttaaatatgaataatgtatagtccatagcttacagtatagtttatcttatatgttc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gaacttaaatatgaataatgtatagtccatagcttacagtatagtttatcttatatgttc 683
Query: 483 atgccacaaacaaacagtaactaggagacataatgtatatgctacctcttttccacacta 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 atgccacaaacaaacagtaactaggagacataatgtatatgctacctcttttccacacta 743
Query: 543 cgtctaaataaagttagtgtaccaaaataccatatacttattaagtgcatacgattttat 602
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 cgtctaaataaagttagtgtaccaaaataccatatacttattaagtgcatacgattttat 803
Query: 603 tttttgagagcagcaccaggaagttttttgtaatgccattcttgtaaatattctcaaata 662
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 804 tttttgagagcagcaccaggaagtttcttgtaatgccattcttgtaaatattctcaaata 863
Query: 663 at 664
||
Sbjct: 864 at 865
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1066
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1056
Effective search space: 691680
Effective search space used: 691680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no153_m08.g1 MSMg01no153_m08.g1 CHROMAT_FILE:
MSMg01no153_m08.g1 PHD_FILE: MSMg01no153_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:18:13 2005
(629 letters)
>mm_chr15_15049477_15050506
Length = 1030
Score = 1195 bits (618), Expect = 0.0
Identities = 627/630 (99%), Gaps = 1/630 (0%)
Strand = Plus / Minus
Query: 1 tatatttcttc-aataaaatggttcctgtagaaacagacgattaaaattatagttttgtt 59
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 830 tatatttcttcaaataaaatggttcctgtagaaacagacgattaaaattatagttttgtt 771
Query: 60 ttgtgttaagcactgccttatacattgagtagcttgtacaaggtggctgtcaatccacca 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 770 ttgtgttaagcactgccttatacattgagtagcttgtacaaggtggctgtcaatctacca 711
Query: 120 cccttcttttatgtggtatactctgcaatttatgatatgaggaaaggcttctggagagaa 179
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 710 cccttcttttatgtggtatactctgcaatttatgataggaggaaaggcttctggagagaa 651
Query: 180 gagacatgacagctgtcaggttctttgtccaaatttaatcaggaatcaaccgtagagaaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 650 gagacatgacagctgtcaggttctttgtccaaatttaatcaggaatcaaccgtagagaaa 591
Query: 240 tgtcctaatccatcaacacctgcttgggataagcagtcaactcaccagagactgagccaa 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 590 tgtcctaatccatcaacacctgcttgggataagcagtcaactcaccagagactgagccaa 531
Query: 300 atatagtgatttaattaattgaaaggttttggcagatcatcagtgtttggggtgtcagtg 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 530 atatagtgatttaattaattgaaaggttttggcagatcatcagtgtttggggtgtcagtg 471
Query: 360 ccagctctggctgtaaccaacacagagcagaaccttcactatagcatatacacactctat 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 ccagctctggctgtaaccaacacagagcagaaccttcactatagcatatacacactctat 411
Query: 420 tctattagaggtttactatatttcctttactttattcatacagcacaattagaaaatact 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 tctattagaggtttactatatttcctttactttattcatacagcacaattagaaaatact 351
Query: 480 tgagagaatgaagtaatatataaagcaccacatctatttttctattaaagttgcctttgt 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 tgagagaatgaagtaatatataaagcaccacatctatttttctattaaagttgcctttgt 291
Query: 540 catttcttacaaattttagatactgaaaattaataaatattcactcatttttgtcatgac 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 catttcttacaaattttagatactgaaaattaataaatattcactcatttttgtcatgac 231
Query: 600 atcatcatactcaaatgctaatatatttac 629
||||||||||||||||||||||||||||||
Sbjct: 230 atcatcatactcaaatgctaatatatttac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 629
Length of database: 1030
Length adjustment: 10
Effective length of query: 619
Effective length of database: 1020
Effective search space: 631380
Effective search space used: 631380
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
