Query= MSMg01no155_b03.b1 MSMg01no155_b03.b1 CHROMAT_FILE:
MSMg01no155_b03.b1 PHD_FILE: MSMg01no155_b03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:53 2005
(352 letters)
>mm_chr15_78821606_78822357
Length = 752
Score = 592 bits (306), Expect = e-173
Identities = 335/352 (95%), Gaps = 12/352 (3%)
Strand = Plus / Minus
Query: 1 gctgcgtgatcagggtctagtcaggcttggggacttatccctttaaccgaggcagctaga 60
||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||
Sbjct: 648 gctgcgtgatcagggtctagtcaggtttggggacttatccctttaactgaggcagctaga 589
Query: 61 ggcagccgtgggccggggccggggccggggtcggtgccggggccggggtcggtgccgagc 120
||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 588 ggcagccgtgggccggggccggg------------accggggccggggtcggtgccgagc 541
Query: 121 tagcagacagaagagctctcaagcctcctctctacatccccaggaccccttccagctctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 tagcagacagaagagctctcaagcctcctctctacatccccaggaccccttccagctctt 481
Query: 181 agaatgtaggaggacggaatgagacagcgggtcaaaccctcagctctcatctctggatgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 agaatgtaggaggacggaatgagacagcgggtcaaaccctcagctctcatctctggatgg 421
Query: 241 ccaaggacacgggctgctctttctgcaatgtgtcactagattaactgagccccagaaggt 300
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 420 ccaaggacacgtgctgctctttctgcaatgtgtcactagattaactgagccccagaaggt 361
Query: 301 acagccaccaggacctcaggcgagtgcacagaaccccactcagggacacaac 352
|||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 360 acagccaccaggccctcaggcgagtgcacagaaccccactcagggacacaac 309
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_b03.g1 MSMg01no155_b03.g1 CHROMAT_FILE:
MSMg01no155_b03.g1 PHD_FILE: MSMg01no155_b03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:19:54 2005
(447 letters)
>mm_chr15_78687839_78688685
Length = 847
Score = 797 bits (412), Expect = 0.0
Identities = 439/448 (97%), Gaps = 1/448 (0%)
Strand = Plus / Plus
Query: 1 actagttacctcaggctggcctgagcttatcctctgcctcaggctcagtcatgcaggtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 actagttacctcaggctggcctgagcttatcctctgcctcaggctcagtcatgcaggtgc 259
Query: 61 cagggatttgaactcggatcctcatgttctcagagcaagtgctcttacacactgagctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 260 cagggatttgaactcggatcctcatgttctcagagcaagtgctcttacacactgagccgt 319
Query: 121 ct-ccctcggagggctccagctcctccctacatgcacacttttgtaagatcaacttcact 179
|| ||| | |||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctccccccagagggctccagcccctccctacatgcacacttttgtaagatcaacttcact 379
Query: 180 cacatcaccggacttgtgatttgcttctgacgggaagagttatttatatagcagtgatgg 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 cacatcaccggacttgtgatttgcttctgacgggaagagttatttatatagcagtgatgg 439
Query: 240 gctgtcccagccaaggctagtgctggggtctgaacgtttgccccaaagctcagctcatgg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 gctgtcccagccaaggctagtgctggggtctgaacgtttgccccaaagctcagctcatgg 499
Query: 300 tgaattcattgtcttcagctgagcacagtggtgcagatctgttagtctaggcttgagagg 359
||||||||||||||||||| |||||||||||||| || ||||||| ||||||||||||||
Sbjct: 500 tgaattcattgtcttcagccgagcacagtggtgccgacctgttagcctaggcttgagagg 559
Query: 360 atcaagagttcaaagtcatctttggctacatggtagatggaggccagcctgggctgctgg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atcaagagttcaaagtcatctttggctacatggtagatggaggccagcctgggctgctgg 619
Query: 420 agacttaatgtcagaaaaataaatgcca 447
||||||||||||||||||||||||||||
Sbjct: 620 agacttaatgtcagaaaaataaatgcca 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
