Query= MSMg01no155_c19.b1 MSMg01no155_c19.b1 CHROMAT_FILE:
MSMg01no155_c19.b1 PHD_FILE: MSMg01no155_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:02 2005
(411 letters)
>mm_chr15_50531653_50532463
Length = 811
Score = 766 bits (396), Expect = 0.0
Identities = 408/412 (99%), Gaps = 2/412 (0%)
Strand = Plus / Plus
Query: 1 cttagcttgcttaccaactcttaaagctctccacccccaacaacttagcaacaacatgaa 60
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 cttagcttgcttaccaactcttaaagctctccacccccaagaacttagcaacaacatgaa 260
Query: 61 aactcttatgcaagctataggtgcattatgcacaatgccttgctggagcttgtcagtatc 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aactcttatgcaaggtataggtgcattatgcacaatgccttgctggagcttgtcagtatc 320
Query: 121 tgccatgctgac-tattcaatattttgaatattaacctggacacaggcattcaagttggc 179
|||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgccatgctgacct-ttcaatattttgaatattaacctggacacaggcattcaagttggc 379
Query: 180 tggcctaagaaaactcgagtaatttcctagcaatgttttaaatggtttcaattatactac 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tggcctaagaaaactcgagtaatttcctagcaatgttttaaatggtttcaattatactac 439
Query: 240 tatgctttttatgattttaataattatattactatgtctttttaagattttcaagttttg 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tatgctttttatgattttaataattatattactatgtctttttaagattttcaagttttg 499
Query: 300 ggatgaaaaataagctccactctgtataagttgttttgacatattgaatctaataagaga 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 ggatgaaaaataagctccactctgtataagttgttttgacatattgaatctaataagaga 559
Query: 360 atttcaattaccagttctttcacaggattcacactactgcaatgatttttta 411
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atttcaattaccagttctttcacaggattcacactactgcaatgatttttta 611
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 411
Length of database: 811
Length adjustment: 9
Effective length of query: 402
Effective length of database: 802
Effective search space: 322404
Effective search space used: 322404
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_c19.g1 MSMg01no155_c19.g1 CHROMAT_FILE:
MSMg01no155_c19.g1 PHD_FILE: MSMg01no155_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:02 2005
(274 letters)
>mm_chr15_50688335_50689008
Length = 674
Score = 466 bits (241), Expect = e-136
Identities = 265/273 (97%)
Strand = Plus / Minus
Query: 1 tttagtccatacaagcttaggatagggagtgtacttgaagacacttgctttatgttattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 473 tttagtccatacaagcttaggatagggagtgtacttgaagacacttgctttatgttagtg 414
Query: 61 tctatcactcagaattatcagtcagattaatattaattcatgctctaaatgcatactttc 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 tctatcactcagaatcatcagtcagattaatattaattcatgctctaaatgcatactttc 354
Query: 121 attagaggctggttttccaaccatgggccaaggcattgctattttgttctttattattgg 180
|||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||| |
Sbjct: 353 attagaggctggttttcctaccatgggccaaggcattgttattttgttctttattattag 294
Query: 181 tccagttaagatggcacagggtagagttttcagaagcaggaggattctggagaccatcat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 293 tccagttaagatggcacagggtagagttttcagaagcaggaggattctggagactaccat 234
Query: 241 attttttcaagcgtgtgattactacagattgta 273
||||||||||| |||||||||||||||||||||
Sbjct: 233 attttttcaagtgtgtgattactacagattgta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
