Query= MSMg01no155_k08.b1 MSMg01no155_k08.b1 CHROMAT_FILE:
MSMg01no155_k08.b1 PHD_FILE: MSMg01no155_k08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:35 2005
(402 letters)
>mm_chr15_23189875_23190676
Length = 802
Score = 679 bits (351), Expect = 0.0
Identities = 384/395 (97%)
Strand = Plus / Plus
Query: 5 gaattctctcctctttcctcattctggtaaatattgacatatttcattccatcatttgaa 64
|||||||||| |||||| |||||||||||||||||||| |||||||||||||||||||||
Sbjct: 205 gaattctctcttctttcttcattctggtaaatattgacgtatttcattccatcatttgaa 264
Query: 65 ctaacagtacttcatagccttttgctttatcattctgctagagaagacatacacagcaca 124
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctaacagtacttcatatccttttgctttatcattctgctagagaagacatacacagcaca 324
Query: 125 tgtcctggttaagtgatttcttcatgataaaacaagcgaattaaagcctgtttccaaata 184
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtcctggttaagtgattccttcatgataaaacaagcgaattaaagcctgtttccaaata 384
Query: 185 aggaaatgtttaatatttaacatgtggctcttgggattcaaattttaaagaatttcaaaa 244
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 385 aggaaatgtttaatatttaacatgtggctcttgggattaaaattttaaagaatttcaaaa 444
Query: 245 tgcattgtgaaagaaacgatatctgggaggctctagcaggcacctgggttgattatgatc 304
| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttcattgtgaaagaaaagatatctgggaggctctagcaggcacctgggttgattatgatc 504
Query: 305 aaacgagatgcactctttcactgttaacatgggatcatcatgggtgtactgtgacttagt 364
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 505 aaacgagatgcactctttcactgttaacatgggatcttcatgggtgtactgtgacttagt 564
Query: 365 taatgcacacccttaacatgggatgttcatggatg 399
||||||| | |||||||||||||||||||||||||
Sbjct: 565 taatgcagatccttaacatgggatgttcatggatg 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no155_k08.g1 MSMg01no155_k08.g1 CHROMAT_FILE:
MSMg01no155_k08.g1 PHD_FILE: MSMg01no155_k08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:20:35 2005
(388 letters)
>mm_chr15_23320990_23321775
Length = 786
Score = 685 bits (354), Expect = 0.0
Identities = 379/388 (97%), Gaps = 4/388 (1%)
Strand = Plus / Minus
Query: 1 agaggacaaacttggggttggttctcatatattgcttgaaggtaaaattactcttgttct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 agaggacaaacttggggttggttctcatatattgcttgaaggtaaaattactcttgttct 526
Query: 61 cagggctgcacatatttctgtgttatataaattctttatacttgaaaggtaaggttatga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 cagggctgcacatatttctgtgttatataaattctttatacttgaaaggtaaggttatga 466
Query: 121 gatataaataaactgagatcaaaacaattttacaataaatgaatattgttaccatacacc 180
||||||||||||||||||||||||||||||||||||||||||||||| ||| | |||||
Sbjct: 465 gatataaataaactgagatcaaaacaattttacaataaatgaatattatta--a-acacc 409
Query: 181 catgttttgacaatactgcatatctacacagttttctgcacaagaaaccatattctctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 408 catgttttgacaatactgcatatctacacagttttctgcacaagaaaccgtattctctaa 349
Query: 241 ctcatattcatatttctggagtctgaaataattcttagtacatggaaagtgatgaatggt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 348 ctcatattcatatttctggagtctgaaataattcttagtacatggaaagtgatcaatagt 289
Query: 301 ccatgcctctcaaatatacttatgtctaatgtgttacttcattgacacatgcataatttc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 288 ccatgcctctcaaatatacttatgtctaatgtgttacttcattgacacatgcagaatttc 229
Query: 361 attttttt-ctgaaatatgaattgacaa 387
|||||||| |||||||||||||||||||
Sbjct: 228 attttttttctgaaatatgaattgacaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 388
Length of database: 786
Length adjustment: 9
Effective length of query: 379
Effective length of database: 777
Effective search space: 294483
Effective search space used: 294483
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
