Query= MSMg01no157_g02.b1 MSMg01no157_g02.b1 CHROMAT_FILE:
MSMg01no157_g02.b1 PHD_FILE: MSMg01no157_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:42 2005
(566 letters)
>mm_chr15_90676925_90677890
Length = 966
Score = 1060 bits (548), Expect = 0.0
Identities = 560/564 (99%)
Strand = Plus / Minus
Query: 3 tttgcatttcagttgaatctgagctgtgaatggtatcttttaaaagtagtgattctcagg 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 910 tttgcatttcagttgaatctgagctgtgaatggtatcttttaaaagtagtgattctcagg 851
Query: 63 gaacacttccttaagaaataattttgagcagagattcaaagcctctaaaacaacaacaac 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 850 gaacacttccttaagaaataattttgagcagagattcaaagcctctaaaacaacaacaac 791
Query: 123 aataacaacaacaacaacaagaaccccatccaggtctttccatgtctttatttatgtatc 182
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 790 aataacaacaacaacaagaagaaccccatccaggtctttccatgtctttatttatgtatc 731
Query: 183 taagagaggcaagcttcagttatttaggaagaatgactcagggcaattagaagggggatg 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 730 taagagaggcaagcttcagttatttaggaagaatgactcagggcaattagaagggggatg 671
Query: 243 gaggtggaaggatgttagtaatttgtagactgcctgacgatttgggttcaaggaggctct 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 670 gaggtggaaggatgttagtaatttgtagactgcctgacgatttgggttcaaggaggctct 611
Query: 303 acattagtaagtcatactgacctttaaaacaggacagagttgagtccagctgcaaagacc 362
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 610 acattagtaagtcatactgacctttaaaacaggacagagttgagttcagctgcaaagacc 551
Query: 363 ctgttgagagtgagggcactgttaactctttaacacatttcatggatactgtagcaataa 422
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 550 ctgttgagagtgagggcactgttaactctttaacacattgcatggatactgtagcaataa 491
Query: 423 tcccgttgtcaacatgaaaatacctgacacatgcaaagatactacaaacagaagtacatc 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 tcccgttgtcaacatgaaaatacctgacacatgcaaagatactacaaacagaagtacatc 431
Query: 483 ttttgtaacttttcaagccatagtacttcataataaggtgggtatttatgtcctttaaaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttttgtaacttttcaagccatagtacttcataataaggtgggtatttatgtcctttaaaa 371
Query: 543 atacttaaggtctattaagatcat 566
|||||||| |||||||||||||||
Sbjct: 370 atacttaatgtctattaagatcat 347
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 566
Length of database: 966
Length adjustment: 10
Effective length of query: 556
Effective length of database: 956
Effective search space: 531536
Effective search space used: 531536
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_g02.g1 MSMg01no157_g02.g1 CHROMAT_FILE:
MSMg01no157_g02.g1 PHD_FILE: MSMg01no157_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:22:42 2005
(289 letters)
>mm_chr15_90529120_90529808
Length = 689
Score = 513 bits (265), Expect = e-150
Identities = 282/289 (97%), Gaps = 4/289 (1%)
Strand = Plus / Plus
Query: 1 tttgatgaggtttctgattattcctttaaattctgcaccccagggttcatctaagtaatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 tttgatgaggtttctgattattcctttaaattctgcaccccagggttcatctaagtaatt 264
Query: 61 cttcattgaagatcatttctataggactgtgtaaaagtacactgactattaaaaatatac 120
||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||
Sbjct: 265 cttcattgaagatcatttctataggactgggcaaaagtacactgactattaaaaatatac 324
Query: 121 ataaatatattgactagactatatatgtatgtatgtatgtaagtaagatctggtcttgtg 180
|||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||
Sbjct: 325 ataaatatattgactaga--atatat--atgtatgtatgtaagtaagatctggtcttgtg 380
Query: 181 gattttcattggctgcatgtctgatgtgatattctaagttgcctcaggctaagccagcat 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 381 gattttcattggctgcatgtctgatgtggtattctaagttgcctcaggctaagccagcat 440
Query: 241 acaggctatgtaacaatccttaggggttgggagtagcatgggtaggttc 289
|||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acaggctatgtaacaatccttaggggttgggagtagcatgggtaggttc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
