Query= MSMg01no157_o17.b1 MSMg01no157_o17.b1 CHROMAT_FILE:
MSMg01no157_o17.b1 PHD_FILE: MSMg01no157_o17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:21 2005
(321 letters)
>mm_chr15_80784958_80785676
Length = 719
Score = 547 bits (283), Expect = e-160
Identities = 293/297 (98%), Gaps = 2/297 (0%)
Strand = Plus / Minus
Query: 5 gaattcaaggtcattcttgcccacagagcaagctcaagctaaggactagaatcagctaca 64
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 460 gaattcaaggtcattcttgcccacagagcatgctcaagctaaggactagaatcagctaca 401
Query: 65 ggagaggctgttagggagcggggacaacttacagagcaggaggacaggacactggattac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ggagaggctgttagggagcggggacaacttacagagcaggaggacaggacactggattac 341
Query: 125 tgggatccataaggaacaatacctttattgttcacagtgtggtggctacactgactgaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tgggatccataaggaacaatacctttattgttcacagtgtggtggctacactgactgaga 281
Query: 185 acttatgtaagtccatgggcttttacatttcttacatggcacattccatcagtagtctct 244
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 280 acttgtgtaagtccatgggcttttacatttcttacatggcacattccatcagtag--tct 223
Query: 245 ctacttttcctcatccaacatccatccatccatccatccatccatccatccatccat 301
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ctacttttcctcatccaacatccatccatccatccatccatccatccatccatccat 166
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 11
Number of successful extensions: 11
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 321
Length of database: 719
Length adjustment: 9
Effective length of query: 312
Effective length of database: 710
Effective search space: 221520
Effective search space used: 221520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no157_o17.g1 MSMg01no157_o17.g1 CHROMAT_FILE:
MSMg01no157_o17.g1 PHD_FILE: MSMg01no157_o17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:21 2005
(290 letters)
>mm_chr15_80657486_80658175
Length = 690
Score = 545 bits (282), Expect = e-160
Identities = 288/290 (99%)
Strand = Plus / Plus
Query: 1 tttatagatgagagaaatttaaaacaggaaggagaaaggcctggcaatcgtggtttgtcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttatagatgagagaaatttaaaacaggaaggagaaaggcctggcaatcgtggtttgtcc 260
Query: 61 tgtactttgccactgaagtacttcccactactatatacatgacagtgtcccagaagccag 120
|||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tgtactttgccattgaagtacttcccactactatatacgtgacagtgtcccagaagccag 320
Query: 121 ttgtagggtgttttagctggactcgaagtttattcacattttcattagagcaatatgccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgtagggtgttttagctggactcgaagtttattcacattttcattagagcaatatgccc 380
Query: 181 atctcctgttcattttatgtttccttggcatctaagtaactgagccagacggaaaacggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atctcctgttcattttatgtttccttggcatctaagtaactgagccagacggaaaacggt 440
Query: 241 ccaacattagattctcttgcaacatgtcagccttttaatttaatacttca 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ccaacattagattctcttgcaacatgtcagccttttaatttaatacttca 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
