Query= MSMg01no158_a04.b1 MSMg01no158_a04.b1 CHROMAT_FILE:
MSMg01no158_a04.b1 PHD_FILE: MSMg01no158_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:28 2005
(331 letters)
>mm_chr15_19058900_19059630
Length = 731
Score = 588 bits (304), Expect = e-172
Identities = 316/320 (98%)
Strand = Plus / Minus
Query: 5 gaattcaaaatagaaacttggcattggcacagtagcaaagaggaaacttagaagaatgct 64
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 324 gaattcaaaatagaaacttggcatcggcacagtagcaaagaggaaacttagaagaatgct 265
Query: 65 gatttataagaaaactctgtaaggaattgattggtatacacattttggttattttgaaag 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gatttataagaaaactctgtaaggaattgattggtatacacattttggttattttgaaag 205
Query: 125 ttttatttttaaattaataagacccatggagcagtgtgaagagtgagcagggttctgtac 184
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 204 ttttatttttaaattaataagacccatggagcagtgtgaagagtgagcaggtttctgtac 145
Query: 185 atgccttctcctgcttcgtttcatcatgacaccctaaatatcatagcacattcgttgaaa 244
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atgccttcacctgcttcgtttcatcatgacaccctaaatatcatagcacattcgttgaaa 85
Query: 245 ctataaatctcaccctgctgcaataggcataagtgaactacagatgtgattcctatttca 304
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 84 ctataaatctcaccctgctgcaataggcatacgtgaactacagatgtgattcctatttca 25
Query: 305 tcaggaatttaaactcattt 324
||||||||||||||||||||
Sbjct: 24 tcaggaatttaaactcattt 5
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 331
Length of database: 731
Length adjustment: 9
Effective length of query: 322
Effective length of database: 722
Effective search space: 232484
Effective search space used: 232484
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_a04.g1 MSMg01no158_a04.g1 CHROMAT_FILE:
MSMg01no158_a04.g1 PHD_FILE: MSMg01no158_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:28 2005
(294 letters)
>mm_chr15_18951425_18952114
Length = 690
Score = 536 bits (277), Expect = e-157
Identities = 288/293 (98%), Gaps = 4/293 (1%)
Strand = Plus / Plus
Query: 1 ttgacagcaactatgcacaattatgccagctatatatcgaaattttcttacatcatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgacagcaactatgcacaattatgccagctatatatcgaaattttcttacatcatttta 260
Query: 61 ccaaaagtgatagcctgagaagacagcatgtaaggactgggtggaaggaagaaaaatctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccaaaagtgatagcctgagaagacagcatgtaaggactgggtggaaggaagaaaaatctt 320
Query: 121 gatgcactctttaaatatttattttaatataggatagaaaaagtggagttcaattttaag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatgcactctttaaatatttattttaatataggatagaaaaagtggagttcaattttaag 380
Query: 181 ttgtttaaaaaagaactgactgagtggcctcgaatacttaaagttaaacttaggttttga 240
||||||||||||||||| | ||||| ||||||||||||||||||||||||||||||||
Sbjct: 381 ttgtttaaaaaagaact-a---agtggtctcgaatacttaaagttaaacttaggttttga 436
Query: 241 gagaattttctgtatatttataatagagtccaattttatatctctttgtattc 293
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 gagaattttctgtatatttataatagagtccaattttatatctctttgtattc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 294
Length of database: 690
Length adjustment: 9
Effective length of query: 285
Effective length of database: 681
Effective search space: 194085
Effective search space used: 194085
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
