Query= MSMg01no158_e12.b1 MSMg01no158_e12.b1 CHROMAT_FILE:
MSMg01no158_e12.b1 PHD_FILE: MSMg01no158_e12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:47 2005
(314 letters)
>mm_chr15_7839605_7840318
Length = 714
Score = 584 bits (302), Expect = e-171
Identities = 308/310 (99%)
Strand = Plus / Plus
Query: 5 gaattcatgtctggtgatgaataactggtactctggggtcccaaagaacctgagtcctga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcatgtctggtgatgaataactggtactctggggtcccaaagaacctgagtcctga 264
Query: 65 gttctcacaagctgttttcaattttcttggggttaggaggaaagatgggagggacagcat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gttctcacaagctgttttcaattttcttggggttaggaggaaagatgggagggacagcat 324
Query: 125 aaagggaatcaaggggggaggggaacatgaagctgacactgggaagcacaaatgccacac 184
|||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagcgaatcaaggggggaggggaccatgaagctgacactgggaagcacaaatgccacac 384
Query: 185 actacattctacaaacctcatttggagcaagaggaggggaaacatgaattcatcgttgac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 actacattctacaaacctcatttggagcaagaggaggggaaacatgaattcatcgttgac 444
Query: 245 taacagcccacttcctgcacgcatgcacacggactaaagggaaagagggacaactgacat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 taacagcccacttcctgcacgcatgcacacggactaaagggaaagagggacaactgacat 504
Query: 305 ctgaggtcct 314
||||||||||
Sbjct: 505 ctgaggtcct 514
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 714
Length adjustment: 9
Effective length of query: 305
Effective length of database: 705
Effective search space: 215025
Effective search space used: 215025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_e12.g1 MSMg01no158_e12.g1 CHROMAT_FILE:
MSMg01no158_e12.g1 PHD_FILE: MSMg01no158_e12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:23:47 2005
(284 letters)
>mm_chr15_8019727_8020410
Length = 684
Score = 518 bits (268), Expect = e-151
Identities = 280/284 (98%)
Strand = Plus / Minus
Query: 1 tcctgtgtctgtctggtttgctttttgcttcttctcttgagaaatgaagtgcagtctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 tcctgtgtctgtctggtttgctttttgcttcttctcttgagaaatgaagtgcagtctttg 373
Query: 61 cagttcactgacttgcgggaatgcaccatacagcgagcgagccccagcaaagagtgtgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 cagttcactgacttgcgggaatgcaccatacagcgagcgagccccagcaaagagtgtgct 313
Query: 121 taagcttactagatatgtgtctgtttcatttgtgaaatcactgaaattcttctctaggaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 312 taagcttactagatatgtgtctgtttcatttgtgaaatcactgaaattcttctttaggaa 253
Query: 181 atgaaggcagagattgttttgttttgttttttagatttatttattatatatctaaaaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 252 atgaaggcagagattgttttgttttgttttttagatttatttattatatatctaagaaca 193
Query: 241 tgctgggagtggtggtgcatgcctttaatcccagcactcgggag 284
||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 192 tgccgggagtggtggtgcatgcctttaatcccagcactggggag 149
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 284
Length of database: 684
Length adjustment: 9
Effective length of query: 275
Effective length of database: 675
Effective search space: 185625
Effective search space used: 185625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
