Query= MSMg01no158_j10.b1 MSMg01no158_j10.b1 CHROMAT_FILE:
MSMg01no158_j10.b1 PHD_FILE: MSMg01no158_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:08 2005
(323 letters)
>mm_chr15_90327943_90328665
Length = 723
Score = 557 bits (288), Expect = e-163
Identities = 312/320 (97%), Gaps = 2/320 (0%)
Strand = Plus / Plus
Query: 5 gaattctctaaataattaattgtatgagtgaactggcttgggcttaaagtgtaattctat 64
|||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||||
Sbjct: 205 gaattctctaaataattaattgtatgagcgaactggcttgggcttaaaatgtaattctat 264
Query: 65 tactgaatattccttttgcccacacagcgcaatcagcagactccaaagaggcccccccaa 124
||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 tactgaaaattcattttgcccacacagcgcaatcagcagactccaaagaggcccccc-aa 323
Query: 125 attagggcactgctcagttagaaccccatcctcaatggcactctttgct-cagtccctgc 183
|||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct: 324 attagggcactgctcagttagagccccatcctcaatggcactctttgcttcagtccctgc 383
Query: 184 aatgaatttaggttggaaaacattgttttcagtttgtctttctacataatgtttatgagt 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 aatgaatttaggttggaaaacattgttttcagtttgtctttctacataatgtttatgagt 443
Query: 244 caatgttttggctgaaacgttaccagtaattatgatgaacagatttgcttgtatacacag 303
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caatgttttggctgaagcgttaccagtaattatgatgaacagatttgcttgtatacacag 503
Query: 304 tatattccttaattttctaa 323
||||||||||||||||||||
Sbjct: 504 tatattccttaattttctaa 523
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space: 224196
Effective search space used: 224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no158_j10.g1 MSMg01no158_j10.g1 CHROMAT_FILE:
MSMg01no158_j10.g1 PHD_FILE: MSMg01no158_j10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:08 2005
(286 letters)
>mm_chr15_90459797_90460482
Length = 686
Score = 530 bits (274), Expect = e-155
Identities = 280/282 (99%)
Strand = Plus / Minus
Query: 1 catgccacacttaaagccacaaattcatcaaactgcaccacagcctgtgatatagctcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 catgccacacttaaagccacaaattcatcaaactgcaccacagcctgtgatatagctcac 384
Query: 61 tgagtactatgcagcatcaggtttgaccaaggcctattctgctatctgagatccaatgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tgagtactatgcagcatcaggtttgaccaaggcctattctgctatctgagatccaatgct 324
Query: 121 gaagtagatttataacctaagatactgcagccacaaagtgtggccaaaagaaaagtctca 180
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gaagtagatttatgacctaagatactgcagccacaaagtgtggccaaaagaaaagtctca 264
Query: 181 tggactgaaaatgacatctcttcttgatgctggccctcttcccaactgtggacgctggcc 240
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 tggactgaaagtgacatctcttcttgatgctggccctcttcccaactgtggacgctggcc 204
Query: 241 tgttcttgcccgagctagtatctcgccggcaagaattcactc 282
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 tgttcttgcccgagctagtatctcgccggcaagaattcactc 162
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
