TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCAAGTGTGAAATATGGTAAATGTAAGAGAGGGATCTTTGAAAAG
CATGACAGGGAGAATCTTGGGTCTACCTAGTCTTGTGTAGATCTTTGTAC
AGTGGCACCTGGATAGCTGGGTTCACACCTGACTTCTGCCTATGGGATTT
TGCTCTATCCTTAGGAAGAAACTTTTTATTCATTCTCATTTATTATTAGT
TTAAAACTCACTTTGCCCACAGATTTCATTATCTATGTAACTTAGACAGC
AAATTTAATATCATTCATATATTTTCCTATCAGTTCAAATATTTACATTA
ATGACACATGAAGAAGAAGCCTATCTGGACCCAGTCTAAACTGGTCCCTG
ATGTCTCTGCACAAATGACAGAACACTTCTGAGCTGAGCTGTGTAGAGAA
ACCAATTGCTTGTTTGCTGATAATGCCCTGAAAGGGCATGGGGTGGAGTT
GATGGTGACTGCGGTGATTCGCAGTTTGTGTGTGTGTGTGTGTGTGTGTG
TGTGNGNNTTTNNNNNNNNNNTNNNNNNTTNTNTTTTTTTTTTTTTTTTT
TNNNTNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTNTTTTTTTTTTTT
TTGTTTTTTTTTTTTTTTTTTTTTNCCCNNNTTNTNTNNTTTTTTTTTTT
TTTTTTCCCCTCCCCTTCTTGTTCTTTCCCCCG

TGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTTACACATTTTTAGAGAAGCCATAAAC
AGGTCAAATTATATCTGGGGAAAGTGTATGTATTAGTTTGTTTAAACCAC
CACGTCAAATTGTCACCAACTGTACTTAACAGATGTTTGTTTTTCTGCAT
TTGTGGATGGTGGAAGTTTGAGGTTTAGACGATGCCAGATGAAAGAGTCT
GCTGAAGCACCTCTTCCTGTGTCCTCTCACGTATCTTCTCTGTGTGCACC
TTAAGAGAAAACTCTCTGATACTTTTTTTCTCTTAAGAGGATGCCCAGAT
TAGGACTCAGACTATTTTTTCTTCCCTCACCACCCCGCCAGGGTCCAGGG
TGCTTCTGAGAAATGCCCCCCCCACTCTGAAAACATAAAAGTACTGTTCT
GTATGACTCAGGTAAAAAGACCGTTTCCCCATCAAACTGGCAGACCACAT
AACGGCTCCCCGCCGAAAACTCATTGGTAGCGCCTCAAACAGCACGCATT
CGTCCTTTTCTTTTCCAATCGCTCTGTTTACCCGAGCTCGTCTGGCCTCA
ATTTGTATATATCCTCCACTTTAATACCCCCCGCCCCCGCCTCCTCGTCC
CCCCCCTCTCACCCTTAACTGCCACTCTCTTCATGTTCCCCCCCACTCCA
TGATTTGTAGCCCCTCAAACCCCCCCGCATTTTACTTTCATACCTCCCCC
TTCTCG

Query= MSMg01no159_a03.b1 MSMg01no159_a03.b1 CHROMAT_FILE:
MSMg01no159_a03.b1 PHD_FILE: MSMg01no159_a03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:24:38 2005
         (513 letters)



>mm_chr15_39657603_39658515
          Length = 913

 Score =  946 bits (489), Expect = 0.0
 Identities = 501/505 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcaagtgtgaaatatggtaaatgtaagagagggatctttgaaaagcatgacagg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcaagtgtgaaatatggtaaatgtaagagagggatctttgaaaagcatgacagg 264

                                                                       
Query: 65  gagaatcttgggtctacctagtcttgtgtagatctttgtacagtggcacctggatagctg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagaatcttgggtctacctagtcttgtgtagatctttgtacagtggcacctggatagctg 324

                                                                       
Query: 125 ggttcacacctgacttctgcctatgggattttgctctatccttaggaagaaactttttat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ggttcacacctgacttctgcctatgggattttgctctatccttaggaagaaactttttat 384

                                                                       
Query: 185 tcattctcatttattattagtttaaaactcactttgcccacagatttcattatctatgta 244
           ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 385 tcattctcatttattattagtttaaaactcactttgcccacagctttcattatctatgta 444

                                                                       
Query: 245 acttagacagcaaatttaatatcattcatatattttcctatcagttcaaatatttacatt 304
           |||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 445 actttgacagcaaatttaatatcattcatatattttcctatcagttcaaatatttatatt 504

                                                                       
Query: 305 aatgacacatgaagaagaagcctatctggacccagtctaaactggtccctgatgtctctg 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 aatgacacatgaagaagaagcctatctggacccagtctaaactggtccctgatgtctctg 564

                                                                       
Query: 365 cacaaatgacagaacacttctgagctgagctgtgtagagaaaccaattgcttgtttgctg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 cacaaatgacagaacacttctgagctgagctgtgtagagaaaccaattgcttgtttgctg 624

                                                                       
Query: 425 ataatgccctgaaagggcatggggtggagttgatggtgactgcggtgattcgcagtttgt 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 625 ataatgccctgaaagggcatggggtggagttgatggtgactgcggtgattcacagtttgt 684

                                    
Query: 485 gtgtgtgtgtgtgtgtgtgtgtgtg 509
           |||||||||||||||||||||||||
Sbjct: 685 gtgtgtgtgtgtgtgtgtgtgtgtg 709


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space:   454209
Effective search space used:   454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)