Query= MSMg01no159_f22.b1 MSMg01no159_f22.b1 CHROMAT_FILE:
MSMg01no159_f22.b1 PHD_FILE: MSMg01no159_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:05 2005
(320 letters)
>mm_chr15_19632367_19633086
Length = 720
Score = 596 bits (308), Expect = e-175
Identities = 314/316 (99%)
Strand = Plus / Minus
Query: 5 gaattccactttgagaactgcttatatatttacagtagaatgggttagtgtggtgcagtg 64
||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||
Sbjct: 520 gaattccactttgagaattgcttatatatttacagtagaatgggctagtgtggtgcagtg 461
Query: 65 tattggtaaatgaaatgaattgaaaaggggataaataaaatataacaacactaaaaatac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 tattggtaaatgaaatgaattgaaaaggggataaataaaatataacaacactaaaaatac 401
Query: 125 agatggatttctggtaaaaaaattatctgtaggaaatacaaaggaaaatttgttacatga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 agatggatttctggtaaaaaaattatctgtaggaaatacaaaggaaaatttgttacatga 341
Query: 185 tctaattatctattttaagttttgagattagctaggctaatttattagaataaaattaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 tctaattatctattttaagttttgagattagctaggctaatttattagaataaaattaac 281
Query: 245 tgtaacttttttaggaggtgtgataatgtaaagtatgaaattctcttaatatattggcct 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tgtaacttttttaggaggtgtgataatgtaaagtatgaaattctcttaatatattggcct 221
Query: 305 gaagtttaatatgtgt 320
||||||||||||||||
Sbjct: 220 gaagtttaatatgtgt 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no159_f22.g1 MSMg01no159_f22.g1 CHROMAT_FILE:
MSMg01no159_f22.g1 PHD_FILE: MSMg01no159_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:25:05 2005
(188 letters)
>mm_chr15_19417003_19417590
Length = 588
Score = 205 bits (106), Expect = 1e-57
Identities = 132/142 (92%), Gaps = 3/142 (2%)
Strand = Plus / Plus
Query: 1 agtgtgctacgaaacaaaggggcattgtgatcgttagcattagcagtaacttgggacaaa 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 agtgtgctacgaaacaaaggggcattgtgatggttagcattagcagtaacttgggacaaa 260
Query: 61 taaaaatcagattactaagattgtcagttgggcatcacatgattatgattatgattatga 120
|||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||| |
Sbjct: 261 taaaaatcagattactaagattgtcagttgggcatcacattattattattattattatta 320
Query: 121 ttatgattgtgattatgattat 142
|||| ||| ||||| |||||
Sbjct: 321 ttattatt---attattattat 339
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 3
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 188
Length of database: 588
Length adjustment: 8
Effective length of query: 180
Effective length of database: 580
Effective search space: 104400
Effective search space used: 104400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
