Query= MSMg01no161_a07.b1 MSMg01no161_a07.b1 CHROMAT_FILE:
MSMg01no161_a07.b1 PHD_FILE: MSMg01no161_a07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:09 2005
(706 letters)
>mm_chr15_22909241_22910346
Length = 1106
Score = 1295 bits (670), Expect = 0.0
Identities = 697/706 (98%)
Strand = Plus / Plus
Query: 1 gttttgttgtgcattgcatttacagagacgtgcccttgcttcaaagtccagaaaagcctt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 gttttgttgtgcattgcatttacagagacgtggccttgcttcaaagtccagaaaagcctt 260
Query: 61 ggaattctgatcattcttccttacccttgaaattggtgtgaatcctactttacatcccca 120
||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||
Sbjct: 261 ggaattctgatcattcttccttacccttgaaattggtatgaatcctagtttacatcccca 320
Query: 121 tttctactctgtagtctcagtgacttatctaaattaggcattgcaagctttatgtggaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttctactctgtagtctcagtgacttatctaaattaggcattgcaagctttatgtggaaa 380
Query: 181 agaaacttgtttcagcttgattccaaattttatttatctgtaccatgagaatatgtatca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaacttgtttcagcttgattccaaattttatttatctgtaccatgagaatatgtatca 440
Query: 241 gtccccatcactaaactaaaatgataagcttgtctcaacaaatggatacttaattctagg 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtccccatcactgaactaaaatgataagcttgtctcaacaaatggatacttaattctagg 500
Query: 301 accaggaggtatgagaggagctcccgggacttaaattatggtcgatctttctcatatctc 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 accaggaggtatgagaggagctcctgggacttaaattatggtcgatctttctcatatctc 560
Query: 361 tagtaccggggtagtatatttatatgcatgcatattgcttataaacagttgtgatctgtt 420
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 561 tagtaccgaggtagtatatttatatgtatgcatattgcttataaacagttgtgatctgtt 620
Query: 421 gacagaggtgatgttctttacttagttctattcaattctacatttattacagcggatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacagaggtgatgttctttacttagttctattcaattctacatttattacagcggatttt 680
Query: 481 ttttcccatctggaacatgatgtttaatgttctgtcacgacaaatgctgactcactgcaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttttcccatctggaacatgatgtttaatgttctgtcacgacaaatgctgactcactgcaa 740
Query: 541 agacatgagcattatgaaagcgtaagaacgagttgccctttaaaacaaaataatggattt 600
||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 741 agacatgagcattatgaaagcgtaaaaacgatttgccctttaaaacaaaataatggattt 800
Query: 601 tcctaaatttagacagttagaaaaacctacaggataatccctggagctatttagccatca 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tcctaaatttagacagttagaaaaacctacaggataatccctggagctatttagccatca 860
Query: 661 ccctgactgcttccttatccttctctgtgtaactcctgtctgcagt 706
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 861 ccctgactgcttccttatccttctctgtgtaactcctgtctgcagt 906
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space: 762816
Effective search space used: 762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)
| Query= MSMg01no161_a07.g1 MSMg01no161_a07.g1 CHROMAT_FILE:
MSMg01no161_a07.g1 PHD_FILE: MSMg01no161_a07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:27:09 2005
(384 letters)
>mm_chr15_23047887_23048673
Length = 787
Score = 632 bits (327), Expect = 0.0
Identities = 374/403 (92%), Gaps = 23/403 (5%)
Strand = Plus / Minus
Query: 1 ttgccaggtgcaacaacatgagcgtaagattgttatgctaagaagatgagccaaagatac 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 687 ttgccaggtgcaacaacatgagcataagattgttatgctaagaagatgagccaaagatac 628
Query: 61 aaaacatagatgaagcctgct--taaacacacac------------------acaatttt 100
||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 627 aaaacatagatgaagcctgcttataaacacacacacacacacacacacacatacaatttt 568
Query: 101 aaatactacatatgtgtgcacatggttattaaaataaaagacatagaaatggagagaaga 160
||||||||||| || ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 567 aaatactacatgtgcgtgcacatggttattaaaataaaagacatagaattggagagaaga 508
Query: 161 gtggtggatcgagctgctaggaaaagtccacaaggttactctttgatgagcatcaagctt 220
|||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||
Sbjct: 507 gtggtggatcgagctgctgggaaaagtccacaaggttactctttgatgggcatcaagctt 448
Query: 221 cagctatgtaatgagaattagaccttcaggtcagtgataaaat---atggaaacaattaa 277
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 447 cagctatgtaatgagaattagaccttcaggtcagtgataaaatatcatggaaacaattaa 388
Query: 278 aatcttgtaatgggtagacagaactagctcagctgttccaacttctgaaattagaaatga 337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aatcttgtaatgggtagacagaactagctcagctgttccaacttctgaaattagaaatga 328
Query: 338 tgaatcagatagagccgagctacacaaatcttctaatcattgg 380
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 tgaatcagatagagccgagctacacaaatcttctaatcattgg 285
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 384
Length of database: 787
Length adjustment: 9
Effective length of query: 375
Effective length of database: 778
Effective search space: 291750
Effective search space used: 291750
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
