Query= MSMg01no163_d02.b1 MSMg01no163_d02.b1 CHROMAT_FILE:
MSMg01no163_d02.b1 PHD_FILE: MSMg01no163_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:44 2005
(661 letters)
>mm_chr15_63207191_63208252
Length = 1062
Score = 1243 bits (643), Expect = 0.0
Identities = 655/659 (99%), Gaps = 1/659 (0%)
Strand = Plus / Plus
Query: 4 ggaattccaccacagttccacgcaagttcactttagctataaccttaggtataatctttt 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaccacagttccacgcaagttcactttagctataaccttaggtataatctttt 263
Query: 64 aaaaattctttaaataaatttaattctttaaataaatgagtggtatcagattaaaaaggt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 aaaaattctttaaataaatttaattctttaaataaatgagtggtatcagattaaaaaggt 323
Query: 124 gtaaatgatagttatcaagaaacatttctaactagtttcacaaactaatccattcattag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtaaatgatagttatcaagaaacatttctaactagtttcacaaactaatccattcattag 383
Query: 184 tttctttccaagtcctttcttttgaatagattagggacaatatactaaccctgaagaaat 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttctttccaagtcctttcttttgaatagattagggacaatatactaaccctgaagaaat 443
Query: 244 ccaattactttgttgggaactattggccctttgggtttcccctttaacagaaataagata 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ccaattactttgttgggaactattggccctttgggtttcccctttaacagaaataagata 503
Query: 304 gtttaacacagaacaccatggctatgatgcaaggaagaactctaattcaggcttccatcc 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtttaacacagaacaccatggctatgatgcaaggaagaactctaattcaggcttccatcc 563
Query: 364 tgagaaatttatggcattattggagccatagttgtgatatcttcagaaaagaggttttag 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cgagaaatttatggcattattggagccatagttgtgatatcttcagaaaagaggttttag 623
Query: 424 taaatacttcagagggttgctgagatttgaaaaagtagaacagattaaggcattttcata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taaatacttcagagggttgctgagatttgaaaaagtagaacagattaaggcattttcata 683
Query: 484 ggcatccagtgcctgaaaattaatagcacttctgattctttttacacttgactatttcct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 ggcatccagtgcctgaaaattaatagcacttctgattctttttacacttgactatttcct 743
Query: 544 aaatattttaaagaag-aaaaaaaagaattttaaggtgttttttgaaagggctttctgag 602
|||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 744 aaatattttaaagaaggaaaaaaaagaattttagggtgttttttgaaagggctttctgag 803
Query: 603 agatatgggaatatttctttaatgttactgaacactgagcttactattttgttattact 661
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 agatatggaaatatttctttaatgttactgaacactgagcttactattttgttattact 862
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 661
Length of database: 1062
Length adjustment: 10
Effective length of query: 651
Effective length of database: 1052
Effective search space: 684852
Effective search space used: 684852
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_d02.g1 MSMg01no163_d02.g1 CHROMAT_FILE:
MSMg01no163_d02.g1 PHD_FILE: MSMg01no163_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:44 2005
(286 letters)
>mm_chr15_63357859_63358544
Length = 686
Score = 542 bits (280), Expect = e-158
Identities = 283/284 (99%)
Strand = Plus / Minus
Query: 1 tatttttctttttcatttctttcttcaaaagtataaaatatatttatttttaagtactgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 tatttttctttttcatttctttcttcaaaagtataaaatatatttatttttaagtactgg 478
Query: 61 ctccaatacatgcaaataccatccaggccaaattaaacacattttctgactgggtggttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 ctccaatacatgcaaataccatccaggccaaattaaacacattttctgactgggtggttc 418
Query: 121 ccacaagtcaccagtttttgaattttggtctatgctcttattactcctgatatgtaaata 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 ccacgagtcaccagtttttgaattttggtctatgctcttattactcctgatatgtaaata 358
Query: 181 tttctaacaccttaatattgtaccacctcagtgtgtttaaatatgtagcaataatatttg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 tttctaacaccttaatattgtaccacctcagtgtgtttaaatatgtagcaataatatttg 298
Query: 241 tgaagctaaatgtggtcccatatgactttcatcaaactgtatga 284
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 tgaagctaaatgtggtcccatatgactttcatcaaactgtatga 254
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
