Query= MSMg01no163_d07.b1 MSMg01no163_d07.b1 CHROMAT_FILE:
MSMg01no163_d07.b1 PHD_FILE: MSMg01no163_d07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:45 2005
(643 letters)
>mm_chr15_7530227_7531269
Length = 1043
Score = 888 bits (459), Expect = 0.0
Identities = 486/503 (96%), Gaps = 14/503 (2%)
Strand = Plus / Minus
Query: 147 gctatttttaagcatctaaatgcatgagttctaactttaattggttatattttaaccatg 206
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1043 gctatttttaagcatctaaatgcatgagttctaactttaattggttatattttaaccatg 984
Query: 207 ggaattattaaatgtgtacaaatagaatagacagatgtgtatgtatgtgtgcattttcat 266
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 983 ggaattattaaatgtgtacaaatagaatagacagatgtgtatgtatgtgtgcactttcat 924
Query: 267 gtatgtatgcatatacatgtatgtatgtatgtatatatgtgtgcattttgtgtatgtata 326
|||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 923 gtatgtatgcatatac--------atgtatgtatatatgtgtgcattttgtgtatgtata 872
Query: 327 tgca------tgtgtgtgtgtgtgtgtgtgtgtatacagttcctctgcacaaatgtgtta 380
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 tgcatgtgtgtgtgtgtgtgtgtgtgtgtgtgtatacagttcctctgcacaaatgtgtta 812
Query: 381 ggagaatattttggtctactatttcacctttgaccctctttggttcctacacagagctac 440
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 ggagaatattttggtctactatttcacctttgaccctctttggttcctacacagagctac 752
Query: 441 caagaccctgtagcttttgagcaataggatcctctgggacagggctgctgagtccttggg 500
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 caagaccctgtagcttttgagcaataggatcctctgggacagggctgctgagtccttggg 692
Query: 501 agtttcctgcatgatgggagcatcttttgtcctagtgaggccaccatcctccgtggcttc 560
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 agtttcctgcatgatgggagcatcttttgtcctagtgaggccaccatcctccgtggcttc 632
Query: 561 aagatgagaactgaccacctgaaattgctggtgtgagggaagtctggagactttggctcc 620
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 631 aagatgagaactgaccacctgaaattgctggtgtgagggaagtctggagactttagctcc 572
Query: 621 actaccctcctcctccagcaggg 643
|||||||||| ||||||||||||
Sbjct: 571 actaccctccgcctccagcaggg 549
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1043
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1033
Effective search space: 653889
Effective search space used: 653889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_d07.g1 MSMg01no163_d07.g1 CHROMAT_FILE:
MSMg01no163_d07.g1 PHD_FILE: MSMg01no163_d07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:30:45 2005
(282 letters)
>mm_chr15_7371294_7371975
Length = 682
Score = 518 bits (268), Expect = e-151
Identities = 277/280 (98%)
Strand = Plus / Plus
Query: 1 tgttttaatttgtcgttcacaactgaagtaattttcaattttctagaaagtgtaaagata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgttttaatttgtcgttcacaactgaagtaattttcaattttctagaaagtgtaaagata 260
Query: 61 cattttccccattggaggtcttagatcaccctgaattctatccatacacttttcttggct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattttccccattggaggtcttagatcaccctgaattctatccatacacttttcttggct 320
Query: 121 tcgaggtccttggattaaaatgggtcctccttcccacttgattccttgaggcctctgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcgaggtccttggattaaaatgggtcctccttcccacttgattccttgaggcctctgctt 380
Query: 181 ccagccatttacaagggaaaaagagaaccaggaatactgttcaggaggttttaggcaggc 240
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 ccagccatttacaagggaaaaagagaaccaggaatactgttcaggaggtgttaggcaggt 440
Query: 241 tgggcattaacagcagcagcagtagtgtatgtgactgcta 280
||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgggcattaacagcagcagcagtagtgtatgtgactgcta 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 282
Length of database: 682
Length adjustment: 9
Effective length of query: 273
Effective length of database: 673
Effective search space: 183729
Effective search space used: 183729
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
