Query= MSMg01no163_j21.b1 MSMg01no163_j21.b1 CHROMAT_FILE:
MSMg01no163_j21.b1 PHD_FILE: MSMg01no163_j21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:14 2005
(343 letters)
>mm_chr15_15684211_15684953
Length = 743
Score = 654 bits (338), Expect = 0.0
Identities = 343/346 (99%), Gaps = 3/346 (0%)
Strand = Plus / Minus
Query: 1 gagtcttttaagataagccattatttccatagcaagcaaatatttttgaataaggaggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 gagtcttttaagataagccattatttccatagcaagcaaatatttttgaataaggaggat 476
Query: 61 caccacataataactttcacaataatcactttctacttttattttcactagtaaaatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 caccacataataactttcacaataatcactttctacttttattttcactagtaaaatttt 416
Query: 121 aaattattatgccacaggggtacatatatactagctactactgaagttctctggtatatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 aaattattatgccacaggggtacatatatactagctactactgaagttctctggtatatt 356
Query: 181 tatggtgtttattaatgcataattcccaaaaatactctttcagcattatcagtctatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 tatggtgtttattaatgcataattcccaaaaatactctttcagcattatcagtctatgta 296
Query: 241 atattgagtcaggaaacactgtattgatatggattttcacaaacaggtaccatagatctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 atattgagtcaggaaacactgtattgatatggattttcacaaacaggtaccatagatctg 236
Query: 301 tagcaaacatgcataaaaacagctcctcctcttcc---tcctcctc 343
||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 235 tagcaaacatgcataaaaacagctcctcctcttccatctcctcctc 190
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 343
Length of database: 743
Length adjustment: 9
Effective length of query: 334
Effective length of database: 734
Effective search space: 245156
Effective search space used: 245156
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no163_j21.g1 MSMg01no163_j21.g1 CHROMAT_FILE:
MSMg01no163_j21.g1 PHD_FILE: MSMg01no163_j21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:15 2005
(281 letters)
>mm_chr15_15553730_15554410
Length = 681
Score = 484 bits (250), Expect = e-141
Identities = 274/282 (97%), Gaps = 2/282 (0%)
Strand = Plus / Plus
Query: 1 ttaatttgaaaactcaatggtttttaattcgaatgaaaatgtgtgtttgtggaccatgtg 60
|||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 201 ttaatttgaaaacttaatggtttttaatttgaatgaaaatgtgtgtttgtggaccatgtg 260
Query: 61 cgtatgttgtacacatgatcgtctgtgtatgtgggatggtg-ttagacaaacatgttttc 119
|||||||||||||||||||||||||||||||||||||||| || |||||||||||||||
Sbjct: 261 tgtatgttgtacacatgatcgtctgtgtatgtgggatggtggtt-gacaaacatgttttc 319
Query: 120 ctccgtcactgtgtactttttgagacaaaaacatctctccaaacctggagctcatcacat 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 ctccgtcactgtgtactttttgagacaaaaacatctctccaaacctggagctcatcacat 379
Query: 180 tagctgggtttgaagtccactgagcttcagaggttctccagcacgttctttcccagagct 239
|||||||||||||||||||||||||| ||| ||||||||||||| |||||||||||||||
Sbjct: 380 tagctgggtttgaagtccactgagctgcaggggttctccagcacattctttcccagagct 439
Query: 240 cggattgcaaacctctatacagttcctcaggctggcacagga 281
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cggattgcaaacctctatacagttcctcaggctggcacagga 481
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 281
Length of database: 681
Length adjustment: 9
Effective length of query: 272
Effective length of database: 672
Effective search space: 182784
Effective search space used: 182784
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
