Query= MSMg01no164_d08.b1 MSMg01no164_d08.b1 CHROMAT_FILE:
MSMg01no164_d08.b1 PHD_FILE: MSMg01no164_d08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:31:59 2005
(318 letters)
>mm_chr15_8915265_8915983
Length = 719
Score = 586 bits (303), Expect = e-172
Identities = 312/315 (99%), Gaps = 1/315 (0%)
Strand = Plus / Plus
Query: 5 gaattctctagtgaatgcaataccattagattgttaaactgaatt-gtcaactctaatca 63
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 205 gaattctctagtgaatgcaataccattagattgttaaactgaatttgtcaactctaatca 264
Query: 64 tgagacaccaacgctccaagtatctcccctaagagtagccgctgacaagcctcttacctg 123
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 tgagacaccaacgctccaagtatctcccctaagagtagcggctgacaagcctcttacctg 324
Query: 124 taacaatgtatctttccactctactctttggagagcacaaagatgcaggtttccagaaaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 taacaatgtatctttccactctactctttggagagcacaaagatgcaggtttccagaaaa 384
Query: 184 gaagaaaagggtaggatagagaaggaaggacccaaataagaaagcctgtgggggtgggag 243
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 385 gaagaaaagggtaggatagagaaggaagaacccaaataagaaagcctgtgggggtgggag 444
Query: 244 acagctaagcaggtaaactgcttgctggacaaatattttatcttgagtttggatccccac 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acagctaagcaggtaaactgcttgctggacaaatattttatcttgagtttggatccccac 504
Query: 304 ctggtcctgcccaaa 318
|||||||||||||||
Sbjct: 505 ctggtcctgcccaaa 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 318
Length of database: 719
Length adjustment: 9
Effective length of query: 309
Effective length of database: 710
Effective search space: 219390
Effective search space used: 219390
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no164_d08.g1 MSMg01no164_d08.g1 CHROMAT_FILE:
MSMg01no164_d08.g1 PHD_FILE: MSMg01no164_d08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:32:00 2005
(348 letters)
>mm_chr15_9045734_9046481
Length = 748
Score = 617 bits (319), Expect = 0.0
Identities = 340/347 (97%)
Strand = Plus / Minus
Query: 1 ctgtaatctaatgatgggcatctcggatggtaagaggaggtgagaagaactggtctatga 60
|||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||
Sbjct: 547 ctgtaatctaatgatgggcatctcggatcgtaagaagaggtgagaagaactggtctatga 488
Query: 61 gagcctgatgttatctgaaaagagggcatcttatgtaggtccatgaaagttaagaatctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 gagcctgatgttatctgaaaagagggcatcttatgtaggtccatgaaagttaagaatctc 428
Query: 121 atgcaggcattgcttacttcattccaaagtcttccttacaccaaataaaagtgtacagca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 atgcaggcattgcttacttcattccaaagtcttccttacaccaaataaaagtgtacagca 368
Query: 181 gtttcgctgaaaaccactagggcttagaaccttgcactctgccgggtgtactgcagaaga 240
||||| ||| |||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct: 367 gtttcactgcaaaccactagggcttagaaccttgcactctcccgggtatactgcagaaga 308
Query: 241 gtcatctggcttacaggagagtatggtactatttatcctactatcagaatgccagttttt 300
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 gtcatctggcttagaggagagtatggtactatttatcctactatcagaatgccagttttt 248
Query: 301 aattcttcctacctagaaatggtgaatttaaaaacaaattatttctc 347
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 aattcttcctacctagaaatggtgaatttaaaaacaaattatttctc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
