Query= MSMg01no165_d16.b1 MSMg01no165_d16.b1 CHROMAT_FILE:
MSMg01no165_d16.b1 PHD_FILE: MSMg01no165_d16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:18 2005
(688 letters)
>mm_chr15_8254660_8255747
Length = 1088
Score = 1309 bits (677), Expect = 0.0
Identities = 683/685 (99%)
Strand = Plus / Plus
Query: 4 ggaattcagagatctgcctgcttttgcctctgccttctgagtgctggaattaaaagcata 63
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 204 ggaattcagagatctgcctgcttttgcctctgccttctgagtgctgggattaaaagcata 263
Query: 64 cacaaccatacctggcttgtaagcaatttatgaaaggaatggggtgtaataaggcaatta 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cacaaccatacctggcttgtaagcaatttatgaaaggaatggggtgtaataaggcaatta 323
Query: 124 tctttaagtatttattaatattaccaacatgattaatagggcttgggtaactcagactct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 tctttaagtatttattaatattaccaacatgattaatagggcttgggtaactcagactct 383
Query: 184 tcatcattctttcagagactaatgtcagtagctacccatacataccaattaaattacaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tcatcattctttcagagactaatgtcagtagctacccatacataccaattaaattacaac 443
Query: 244 ctgacagtgatatcaaaacatatccaactaagttattatttttatatgtatttgaacaaa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctgacagtgatatcaaaacatatccaactaagttattatttttatatgtatttgaacaaa 503
Query: 304 acactctaacaataaaaccaaaagtacagtacatactgttctcttataaataagaaaaaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 acactctaacaataaaaccaaaagtacagtacatactgttctcttataaataagaaaaaa 563
Query: 364 atttattaccagcctcaggcatgagagttttagatttcttttaaaaagagcatttaattc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 atttattaccagcctcaggcatgagagttttagatttcttttaaaaagagcatttaattc 623
Query: 424 aggtactgtattagtttcctgaacctaattctctatactctaatgtatttccaggaaagc 483
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 624 aggtactgtattagtttcctgtacctaattctctatactctaatgtatttccaggaaagc 683
Query: 484 tgtatagagctgctttcaaaacacattttattacactaatgcttccagaaactgaacatg 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tgtatagagctgctttcaaaacacattttattacactaatgcttccagaaactgaacatg 743
Query: 544 gatgaggtatgtatcccaactgtttctataagtaagtctacatggattgcccattaacaa 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 gatgaggtatgtatcccaactgtttctataagtaagtctacatggattgcccattaacaa 803
Query: 604 gtgacagatatatgtaacaacactatttgctctgaaaaagaacaattttaagaaatgcaa 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 gtgacagatatatgtaacaacactatttgctctgaaaaagaacaattttaagaaatgcaa 863
Query: 664 attggacaaaactttcatcatgtcc 688
|||||||||||||||||||||||||
Sbjct: 864 attggacaaaactttcatcatgtcc 888
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1088
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1078
Effective search space: 730884
Effective search space used: 730884
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no165_d16.g1 MSMg01no165_d16.g1 CHROMAT_FILE:
MSMg01no165_d16.g1 PHD_FILE: MSMg01no165_d16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:33:18 2005
(650 letters)
>mm_chr15_8410913_8411965
Length = 1053
Score = 793 bits (410), Expect = 0.0
Identities = 424/430 (98%), Gaps = 3/430 (0%)
Strand = Plus / Minus
Query: 3 ggtttggagcgtaaggcataaataaaataatcgcatcacagtatctaaatacaaattgag 62
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ggtttggagcgtaagacataaataaaataatcgcatcacagtatctaaatacaaattgag 371
Query: 63 gtaagcaggctaaagg---aaaaaaaaaacttatgagcacaccagcttggtggaaaataa 119
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct: 370 gtaagcaggctaaaggaaaaaaaaaaaaacttatgagcacaccggcttggtggaaaataa 311
Query: 120 tgttgttccaagcattgggaaagatggctaagcaggtggaacagagcactaaggcagagg 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tgttgttccaagcattgggaaagatggctaagcaggtggaacagagcactaaggcagagg 251
Query: 180 gggatggagacaaggctggggcagttagaaacacacccaagacttatttaaggctcttat 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gggatggagacaaggctggggcagttagaaacacacccaagacttatttaaggctcttat 191
Query: 240 ctcttatctttaaagtaacacgagccattgaagacttttaagcagccaaattacattatc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 ctcttatctttaaagtaacacgagccattgaagacttttaagcagccaaattacattatc 131
Query: 300 aaacttatgttttgaaaagatcactgtggcagcaggagaaagttgggggcaagggatgta 359
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 aaatttatgttttgaaaagatcactgtggcagcaggagaaagttgggggcaagggatgta 71
Query: 360 tcactgtggatgccagaagcccagactgtaagcaattcctgtaatggtaggtgagattga 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tcactgtggatgccagaagcccagactgtaagcaattcctgtaatggtaggtgagattga 11
Query: 420 tggcagccat 429
||||||||||
Sbjct: 10 tggcagccat 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1053
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1043
Effective search space: 667520
Effective search space used: 667520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|