Query= MSMg01no166_i16.b1 MSMg01no166_i16.b1 CHROMAT_FILE:
MSMg01no166_i16.b1 PHD_FILE: MSMg01no166_i16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:04 2005
(310 letters)
>mm_chr15_92231856_92232565
Length = 710
Score = 586 bits (303), Expect = e-172
Identities = 306/307 (99%)
Strand = Plus / Minus
Query: 4 ggaattctatagaaaaaaagtattgttgacagaaagttacatattaagcaaactttaaat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ggaattctatagaaaaaaagtattgttgacagaaagttacatattaagcaaactttaaat 451
Query: 64 cgtgtaaaggatgatttttttttctaaatgtaacactatcaataattctgctccaacatg 123
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 cgtgtaaaggatgattttcttttctaaatgtaacactatcaataattctgctccaacatg 391
Query: 124 caactctcttagctgagaacttggcacggaattaacttatttaatgccaactagtcatta 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 caactctcttagctgagaacttggcacggaattaacttatttaatgccaactagtcatta 331
Query: 184 atcaagatgacagctgtaatgagcgagtccagcatctctgacaagatcatttatttatcc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atcaagatgacagctgtaatgagcgagtccagcatctctgacaagatcatttatttatcc 271
Query: 244 tacattttgaatgcacatgaaaagctttggagaacgctgcctgcaaggtaaggtcaacag 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tacattttgaatgcacatgaaaagctttggagaacgctgcctgcaaggtaaggtcaacag 211
Query: 304 tattact 310
|||||||
Sbjct: 210 tattact 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 710
Length adjustment: 9
Effective length of query: 301
Effective length of database: 701
Effective search space: 211001
Effective search space used: 211001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_i16.g1 MSMg01no166_i16.g1 CHROMAT_FILE:
MSMg01no166_i16.g1 PHD_FILE: MSMg01no166_i16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:04 2005
(633 letters)
>mm_chr15_92035655_92036687
Length = 1033
Score = 1193 bits (617), Expect = 0.0
Identities = 630/635 (99%), Gaps = 2/635 (0%)
Strand = Plus / Plus
Query: 1 agcagtgatcttctctgtgccttgacctatttggtataggtgttttaacttttttattca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agcagtgatcttctctgtgccttgacctatttggtataggtgttttaacttttttattca 260
Query: 61 ttttttattagttttgatctcatttagtctatcaaagaattgactgtttaattcttggta 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttttttattagttttgatcacatttagtctatcaaagaattgactgtttaattcttggta 320
Query: 121 atttccagtttattcatctgtgccctgttcttatctattccttttcatatgagggtttgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atttccagtttattcatctgtgccctgttcttatctattccttttcatatgagggtttgg 380
Query: 181 agtttggcttattcttcttttcccagggctgatgtatattgttgtgtttttttagtttgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtttggcttattcttcttttcccagggctgatgtatattgttgtgtttttttagtttgt 440
Query: 241 tttgtttttgcttgtttgtttatttgaaatttctctgattccctactgtaggtaattaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttgtttttgcttgtttgtttatttgaaatttctctgattccctactgtaggtaattaaa 500
Query: 301 acaacaaaatgtactcttagaactgcttttattgtatcccataggttgtcatattttata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaacaaaatgtactcttagaactgcttttattgtatcccataggttgtcatattttata 560
Query: 361 catttattgtcattgaataatagcatttaaaattttctttcttggttacttcaatgaccc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 catttattgtcattgaataatagcatttaaaattttctttcttggttacttcaatgaccc 620
Query: 421 cactaatcactgtgttgtgtttttttttt--aaatcttcttaagttgcatttgttgtatt 478
|| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 621 cattaatcactgtgttgtgttttttttttttaaatcttcttaagttgcatttgttgtatt 680
Query: 479 ttctcttgctgctgatttctgggttttgctttgtttttgggttttgtttttttgtttttt 538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ttctcttgctgctgatttctgggttttgctttgtttttgggttttgtttttttgtttttt 740
Query: 539 gattttttgctgttgtctcgttttattcttttttcaattctggtcacctataactatatc 598
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gtttttttgctgttgtctcgttttattcttttttcaattctggtcacctataactatatc 800
Query: 599 tgtgaagactgtcccaataaacaaactatttttag 633
|||||||||||||||||||||||||||||||||||
Sbjct: 801 tgtgaagactgtcccaataaacaaactatttttag 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 39
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 633
Length of database: 1033
Length adjustment: 10
Effective length of query: 623
Effective length of database: 1023
Effective search space: 637329
Effective search space used: 637329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
