Query= MSMg01no166_o03.b1 MSMg01no166_o03.b1 CHROMAT_FILE:
MSMg01no166_o03.b1 PHD_FILE: MSMg01no166_o03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:30 2005
(561 letters)
>mm_chr15_101106602_101107563
Length = 962
Score = 1056 bits (546), Expect = 0.0
Identities = 555/558 (99%), Gaps = 1/558 (0%)
Strand = Plus / Minus
Query: 5 gaattcttttgcctgtcccgaggtacaaggaaagcaagagggaactagtctggacattag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 gaattcttttgcctgtcccgaggtacaaggaaagcaagagggaactagtctggacattag 703
Query: 65 ctacaaccattctgctcccagactgtgtcagtcatcaaagagatggggaaactgggtctg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 ctacaaccattctgctcccagactgtgtcagtcatcaaagagatggggaaactgggtctg 643
Query: 125 ggtgaagcact-ggcttctctaacagggaagggaagtgggccgggtgctagggttgctgg 183
||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 642 ggtgaagcactgggcttctctaacagggaagggaagtgggccgggtgctagagttgctgg 583
Query: 184 gaaagctcacttggaatgaggtattgtcccaagatgcattcttggaccatgctaggcagg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gaaagctcacttggaatgaggtattgtcccaagatgcattcttggaccatgctaggcagg 523
Query: 244 gtctgcccgagcccatagacctttcttaggactgaggctgaaatgcactcccagatctca 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gtctgcccgagcccatagacctttcttaggactgaggctgaaatgcactcccagatctca 463
Query: 304 aatgaggatgcacagctgggaatccttagggaatctttcatgctgagttagagcctagaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aatgaggatgcacagctgggaatccttagggaatctttcatgctgagttagagcctagaa 403
Query: 364 gcgcttatgtcgtcttcctgactgtagagcagagccccttttggcccactctgatccagc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gcgcttatgtcgtcttcctgactgtagagcagagccccttttggcccactctgatccagc 343
Query: 424 tcctctcatccagaggccacggagatgttgccttggctcctgaagccaagggtactgaga 483
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 342 tcctctcatccagaggccacggagatgttgccttgggtcctgaagccaagggtactgaga 283
Query: 484 aatgactgtgaaggccatgccttcagggctcctgtgaaattctggaaaagagctgaagct 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 aatgactgtgaaggccatgccttcagggctcctgtgaaattctggaaaagagctgaagct 223
Query: 544 aagcaccacgaaggtgga 561
||||||||||||||||||
Sbjct: 222 aagcaccacgaaggtgga 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 561
Length of database: 962
Length adjustment: 10
Effective length of query: 551
Effective length of database: 952
Effective search space: 524552
Effective search space used: 524552
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no166_o03.g1 MSMg01no166_o03.g1 CHROMAT_FILE:
MSMg01no166_o03.g1 PHD_FILE: MSMg01no166_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:30 2005
(348 letters)
>mm_chr15_100945837_100946584
Length = 748
Score = 611 bits (316), Expect = e-179
Identities = 331/336 (98%)
Strand = Plus / Plus
Query: 1 actcagctctgagcctggagaagctgccaccatccaagtctagcaggatcttagggcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actcagctctgagcctggagaagctgccaccatccaagtctagcaggatcttagggcaag 260
Query: 61 cattgagcaatggcagagagcacagtaaccccccagtcccccaatcccttcctaacccgc 120
||||||||||||||||||| ||||| ||||||||| |||||||||||||||||||||||
Sbjct: 261 gattgagcaatggcagagagtacagtcaccccccagccccccaatcccttcctaacccgc 320
Query: 121 ttgacccggctcagctctgaggtgtttatggcagctttctgcaggcacagccatctgtca 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttgacctggctcagctctgaggtgtttatggcagctttctgcaggcacagccatctgtca 380
Query: 181 cctgccttgtttcttggtatcagctaccccacagaagggctagtgagcttttgaggtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgccttgtttcttggtatcagctaccccacagaagggctagtgagcttttgaggtgtg 440
Query: 241 ggggtggactgagccacaggctggccctctgctgtgatggagaccctagagtcccaggta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggggtggactgagccacaggctggccctctgctgtgatggagaccctagagtcccaggta 500
Query: 301 aggttgggggatgggaaatgataacccctgtcatga 336
||||||||||||||||||||||||||||||||||||
Sbjct: 501 aggttgggggatgggaaatgataacccctgtcatga 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
