Query= MSMg01no167_a15.b1 MSMg01no167_a15.b1 CHROMAT_FILE:
MSMg01no167_a15.b1 PHD_FILE: MSMg01no167_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:42 2005
(695 letters)
>mm_chr15_101734637_101735731
Length = 1095
Score = 1232 bits (637), Expect = 0.0
Identities = 681/703 (96%), Gaps = 12/703 (1%)
Strand = Plus / Plus
Query: 5 gaattcctcccagcgccagacagagtaagcgcgtgagtaccaaccgtaggaagcaaggga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcccagcgccagacagagtaagcgcgtgagtaccaaccgtaggaagcaaggga 264
Query: 65 tttagtggtaataacattgtctaccatgaagctgccatcatcaccaacctggcatgtgcc 124
||||||||||| |||||||| |||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 tttagtggtaagaacattgtttaccatgaagctgccatcgtcaccaacctggcatgtgcc 324
Query: 125 cacagtgccaacactttactaggtcagacactggggcatctcacttgtctcctgtccttt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cacagtgccaacactttactaggtcagacactggggcatctcacttgtctcctgtccttt 384
Query: 185 cttcagagggacatcatccagagaaatagcattccctactcaaaaacccaggaactccaa 244
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
Sbjct: 385 cttcagagggacatcatccagagaaatagcattccctactcaaaaacccaagaactccca 444
Query: 245 ttttctggaaggtgaatgaaatagagtcggaagctggatccctccaggtctctgctccag 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ttttctggaaggtgaatgaaatagagtcggaagctggatccctccaggtctctgctccag 504
Query: 305 gtgtctttgtttaattggcatttttcatctatgagataccctctacttcttaaggaggaa 364
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 505 gtgtctttgtttaattggcatttttcatctatgagataccctctacttcctaaggaggaa 564
Query: 365 gcatcagtcccctggcccagcttaacgaagtatttctgtctgtggcctctgtgctctgag 424
|||||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||||
Sbjct: 565 gcatcagtcccctggcccagcttaacgaggtatttctgtctttggtctctgtgctctgag 624
Query: 425 tgcccaggcagcaggccatgaccagatggagccagtgaaatctcagggatagagctctct 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgcccaggcagcaggccatgaccagatggagccagtgaaatctcagggatagagctctct 684
Query: 485 cacccagtcaatctggtagaaataggagcctggactcaggatatcaagagagcctaatga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cacccagtcaatctggtagaaataggagcctggactcaggatatcaagagagcctaatga 744
Query: 545 ggctggtccacctgtcagtttaaaagagaagagtgaaggctttggaatccttgctcctaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ggctggtccacctgtcagtttaaaagagaagagtgaaggctttggaatccttgctcctaa 804
Query: 605 gtccctcccgatgtgcacgtgacctt------------ccagacagcacttcagtgacca 652
|||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 805 gtccctcccgatgtgcacgtgaccttgcacgtgaccttccagacagcacttcagtgacca 864
Query: 653 agtgattcttgaccaggccatcttggtacaaggcagaggtctg 695
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 cgtgattcttgaccaggccatcttggtacaaggcagaggtctg 907
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 695
Length of database: 1095
Length adjustment: 10
Effective length of query: 685
Effective length of database: 1085
Effective search space: 743225
Effective search space used: 743225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no167_a15.g1 MSMg01no167_a15.g1 CHROMAT_FILE:
MSMg01no167_a15.g1 PHD_FILE: MSMg01no167_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:35:42 2005
(547 letters)
>mm_chr15_101882006_101882952
Length = 947
Score = 814 bits (421), Expect = 0.0
Identities = 421/421 (100%)
Strand = Plus / Minus
Query: 1 gggcacattttctgcgcctcctttcttcgcttcccgacagtccctagctggaaggatctt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gggcacattttctgcgcctcctttcttcgcttcccgacagtccctagctggaaggatctt 362
Query: 61 ctgatttccagatagctcttggactggagagaaccttcgagtcttgcgctccaacaaccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctgatttccagatagctcttggactggagagaaccttcgagtcttgcgctccaacaaccc 302
Query: 121 cacaccaatttcccaagaaaagttcgtgggagctctttgttatcataattacccaaagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 cacaccaatttcccaagaaaagttcgtgggagctctttgttatcataattacccaaagaa 242
Query: 181 gaattaaataattttggagtgcgtgctcatgtaagggtcgggtttttttgtttgtttgtt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gaattaaataattttggagtgcgtgctcatgtaagggtcgggtttttttgtttgtttgtt 182
Query: 241 tgttttttgtttttaaatcaatcttgtggcacacgaatgaaaatcccatcctcccacccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgttttttgtttttaaatcaatcttgtggcacacgaatgaaaatcccatcctcccacccc 122
Query: 301 cagcatgcgcaaccaggaggataggttctgggtcctccttggtaacatagccagttcaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 cagcatgcgcaaccaggaggataggttctgggtcctccttggtaacatagccagttcaag 62
Query: 361 gccagcctagggagcaagctatcctgtctcaaacacaaattctgttatagtttgacaaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gccagcctagggagcaagctatcctgtctcaaacacaaattctgttatagtttgacaaag 2
Query: 421 t 421
|
Sbjct: 1 t 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space: 503169
Effective search space used: 503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
