Query= MSMg01no168_e18.b1 MSMg01no168_e18.b1 CHROMAT_FILE:
MSMg01no168_e18.b1 PHD_FILE: MSMg01no168_e18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:26 2005
(385 letters)
>mm_chr15_19816282_19817064
Length = 783
Score = 710 bits (367), Expect = 0.0
Identities = 380/385 (98%), Gaps = 2/385 (0%)
Strand = Plus / Minus
Query: 1 caaggcagtattattctggaaaaagtaaaattattgaaaaacacccatgaagaaaaaagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 583 caaggcagtattattctggaaaaagtaaaattattgaaaaacacccatgaagaaaaaagc 524
Query: 61 atctagcaaacacaggaaaaagggtaagaacatgaaacaccttgcttgaaagtggatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 atctagcaaacacaggaaaaagggtaagaacatgaaacaccttgcttgaaagtggatgga 464
Query: 121 gccaaagtgttcagagcacaacttgtattgcagaagagctacagggagtaaaactgcaca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gccaaagtgttcagagcacaacttgtattgcagaagagctacagggagtaaaactgcaca 404
Query: 181 aaggaagatggctgggtctcttgagtgagacctagattcgacaggcaattgtgtgttaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 aaggaagatggctgggtctcttgagtgagacctagattcgacaggcaattgtgtgttaat 344
Query: 241 gttaaaattaagacacataacagaggagtgaatgatgtaataccatccttgtaaaggacg 300
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 343 gttaaaattaagacacataac--aggagtgaatgatgtaataccatccttgtaaaggacg 286
Query: 301 ttatacaatacttgaaaccctgtgcccttctatattttttgttacacagaaaagccaacc 360
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 285 ttatacaatacttgaaaccctgtgcccttctatatttaaagttacacagaaaagccaacc 226
Query: 361 aaaaaaattggtgatgatgtggata 385
|||||||||||||||||||||||||
Sbjct: 225 aaaaaaattggtgatgatgtggata 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 783
Length adjustment: 9
Effective length of query: 376
Effective length of database: 774
Effective search space: 291024
Effective search space used: 291024
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no168_e18.g1 MSMg01no168_e18.g1 CHROMAT_FILE:
MSMg01no168_e18.g1 PHD_FILE: MSMg01no168_e18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:37:26 2005
(379 letters)
>mm_chr15_19711593_19712370
Length = 778
Score = 673 bits (348), Expect = 0.0
Identities = 369/376 (98%), Gaps = 1/376 (0%)
Strand = Plus / Plus
Query: 1 acacagacacacataatcacatgatgaaaaataaacccattttaaaaaatattagatcag 60
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 201 acacagacacacacaatcacatgatgaaaaataaacccattttaaaaaatattagattag 260
Query: 61 actttcaaaggaaaatgccaatcattttatttaatcttgttaagttgaccaatccaataa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actttcaaaggaaaatgccaatcattttatttaatcttgttaagttgaccaatccaataa 320
Query: 121 attatatgtattgatgaagaaaggagtatacccaaacaaaatatacatgtaataatgaat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attatatgtattgatgaagaaaggagtatacccaaacaaaatatacatgtaataatgaat 380
Query: 181 atagagatgacattgtttttcattttgcccccaccaacctttaattttgaaatgaattac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atagagatgacattgtttttcattttgcccccaccaacctttaattttgaaatgaattac 440
Query: 241 atgcagtcttacaaatttagactgattagctatttatgaagttatgattcaaacatcatc 300
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 atgcagtcttacaaatttagactgatcagctatttatgaagttatgattcaaacatcatc 500
Query: 301 agtttgtttaagctattaaagattggtttttataatattcctatgtagcacatgcatcac 360
|||| ||||||||||||||||||||||| ||||||||||||||||| ||||||||||||
Sbjct: 501 agtt-gtttaagctattaaagattggttaatataatattcctatgtaccacatgcatcac 559
Query: 361 taaaatacagtgatat 376
||||||||||||||||
Sbjct: 560 taaaatacagtgatat 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 379
Length of database: 778
Length adjustment: 9
Effective length of query: 370
Effective length of database: 769
Effective search space: 284530
Effective search space used: 284530
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
