Query= MSMg01no169_f23.b1 MSMg01no169_f23.b1 CHROMAT_FILE:
MSMg01no169_f23.b1 PHD_FILE: MSMg01no169_f23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:03 2005
(315 letters)
>mm_chr15_81900778_81901496
Length = 719
Score = 586 bits (303), Expect = e-172
Identities = 309/313 (98%), Gaps = 4/313 (1%)
Strand = Plus / Minus
Query: 5 gaattctgtttttcaaaaatgacttcccatgcaccccacttctgcctgccaggaacctct 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 gaattctgtttttcaaaaatgacttcccatgcaccccacttctgcctgccaggaacctct 458
Query: 65 gcctgtcattcccgacatcacaaagattaaaaacagtctctcctcca----ttttttttt 120
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 457 gcctgtcattcccgacatcacaaagattaaaaacagtctctcctccattttttttttttt 398
Query: 121 tttcctcactagagctaaaagggagtggagcagaggagctgagctggggctcaataccta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 tttcctcactagagctaaaagggagtggagcagaggagctgagctggggctcaataccta 338
Query: 181 gagatggaggagagcaaacagaagggttggtggggagcagggaacagagagtggagtgtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gagatggaggagagcaaacagaagggttggtggggagcagggaacagagagtggagtgtg 278
Query: 241 cagctctgagccctggaggtatccaggggctcctccagactctgcacctagggacaggct 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 cagctctgagccctggaggtatccaggggctcctccagactctgcacctagggacaggct 218
Query: 301 cactagagactca 313
|||||||||||||
Sbjct: 217 cactagagactca 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 719
Length adjustment: 9
Effective length of query: 306
Effective length of database: 710
Effective search space: 217260
Effective search space used: 217260
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no169_f23.g1 MSMg01no169_f23.g1 CHROMAT_FILE:
MSMg01no169_f23.g1 PHD_FILE: MSMg01no169_f23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:39:03 2005
(274 letters)
>mm_chr15_81736076_81736749
Length = 674
Score = 522 bits (270), Expect = e-153
Identities = 273/274 (99%)
Strand = Plus / Plus
Query: 1 ttccagacattgccaacctagcagaagaattcaaggatcacttagtgcctgatcctggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttccagacattgccaacctagcagaagaattcaaggatcacttagtgcctgatcctggct 260
Query: 61 gccagtatgaccaagtgattgaaattaacctcaatgaggtgagcggagaagtagagtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccagtatgaccaagtgattgaaattaacctcaatgaggtgagcggagaagtagagtttg 320
Query: 121 ggggactgctgagggtggggcttttattttttggcactaggcaggatggtaggggagcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggggactgctgagggtggggcttttattttttggcactaggcaggatggtaggggagcaa 380
Query: 181 gtcctatcagcacatccagcaaggcagttggccctttattcctagggcctaaatcaggca 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcctatcagcacatctagcaaggcagttggccctttattcctagggcctaaatcaggca 440
Query: 241 ggagttggggacagacagaaggacatgacattca 274
||||||||||||||||||||||||||||||||||
Sbjct: 441 ggagttggggacagacagaaggacatgacattca 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
