Query= MSMg01no170_n14.b1 MSMg01no170_n14.b1 CHROMAT_FILE:
MSMg01no170_n14.b1 PHD_FILE: MSMg01no170_n14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:55 2005
(311 letters)
>mm_chr15_63650606_63651317
Length = 712
Score = 369 bits (191), Expect = e-107
Identities = 280/323 (86%), Gaps = 24/323 (7%)
Strand = Plus / Plus
Query: 9 tctccttaccctgaaggggaaagcaggccttggaagatgacaaggtctctcccctgccta 68
||||| ||||||||||||||| ||| |||||||||||||||| |||||| | ||||||
Sbjct: 209 tctccctaccctgaaggggaacgcaagccttggaagatgacatggtctcagctctgcctg 268
Query: 69 cacaggtttttctgaggtttctcatgttcgcacaccaggg-tccccccttccttctgttt 127
||||||||||||||||||||||||||||||||| |||||| |||| |||||| ||||||
Sbjct: 269 cacaggtttttctgaggtttctcatgttcgcaccccagggttccctccttccccctgttt 328
Query: 128 tgaatcagggtcttaatatattgcccaatcgggacccaaataacctcctatgtctacctc 187
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 329 tgaatcagggtgttaatatattgcccaatcgggacccaaatgacctcctatgtctacctc 388
Query: 188 ccaggtacctggtgttacagatg--acacagtgtaagcccctatgccgttatcatgggtc 245
||||||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||
Sbjct: 389 ccaggtacctggtgttacagatgcgacacagtgtaagccc-tatgccattatcatgggtc 447
Query: 246 tgaaat--------------------agcacacaatcactggttttgtttgattttttcc 285
|||||| |||||||||||| ||||||||||||| |||||||
Sbjct: 448 tgaaattgttagcatggttctgaaatagcacacaatcaatggttttgtttgagtttttcc 507
Query: 286 ggatgattcctgcatgggacctt 308
|||||||||||| ||| ||||||
Sbjct: 508 ggatgattcctgaatgtgacctt 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 712
Length adjustment: 9
Effective length of query: 302
Effective length of database: 703
Effective search space: 212306
Effective search space used: 212306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no170_n14.g1 MSMg01no170_n14.g1 CHROMAT_FILE:
MSMg01no170_n14.g1 PHD_FILE: MSMg01no170_n14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:40:55 2005
(243 letters)
>mm_chr15_63885115_63885757
Length = 643
Score = 429 bits (222), Expect = e-125
Identities = 237/242 (97%)
Strand = Plus / Minus
Query: 1 tcttcttgcaagttgtatgaccttgcttggcatctcagcgcctatttcccagcctcttgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tcttcttgcaagttgtatgaccttgcttggcatctcagcgcctatttcccagcctcttgt 383
Query: 61 agccctttgaacaatgcttccatgaggttgcacatccgggtgctgctatcgtttgagtcc 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 382 ggccctttgaacaatgcttccatgaggttgcacatccaggtgctgctatcgtttgagtcc 323
Query: 121 ctggttcatacagcgcccccagggctaggactcggagcctggggacactgggtggaggga 180
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 ctggttcatacagcacctccagggctaggactcggagcctggggacactgggtggaggga 263
Query: 181 aggtctgtactgccgatgtcttccccagccccggctctgttcggaaccaggatgaagtag 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 262 aggtctgtactgccgatgtcttccccagccccagctctgttcggaaccaggatgaagtag 203
Query: 241 gt 242
||
Sbjct: 202 gt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 643
Length adjustment: 9
Effective length of query: 234
Effective length of database: 634
Effective search space: 148356
Effective search space used: 148356
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
