Query= MSMg01no171_h24.b1 MSMg01no171_h24.b1 CHROMAT_FILE:
MSMg01no171_h24.b1 PHD_FILE: MSMg01no171_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:44 2005
(324 letters)
>mm_chr15_16414227_16414945
Length = 719
Score = 542 bits (280), Expect = e-158
Identities = 307/318 (96%), Gaps = 7/318 (2%)
Strand = Plus / Minus
Query: 5 gaattcattattcttacaaaatctcagtcttcagatgtaaattccttttatacacaaaat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaattcattattcttacaaaatctcagtcttcagatgtaaattccttttatacacaaaat 457
Query: 65 atcccataaggttaaagttacagaagtacaatgtcataagtttgctttatctattgttct 124
|||||||||||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct: 456 atcccataaggttaaagttacagaagtacaatgtcataagtttgctttgtata---ttct 400
Query: 125 aatttttttctgagagcaactatc-tatttcttaagatgacattttcaccattcattact 183
|||||||| |||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct: 399 aatttttt--tgagagcaactatcttatttcttaaaatgacattttcaccattcattact 342
Query: 184 accttgtcattataaactactataatttaagttcttgttcataaagtgctaagtgcatgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 341 accttgtcattataaactactataatttaagttcttgttcataaagtgctaagtgcatgc 282
Query: 244 ttgaaggtatgctgaatactatatgaatatgatacattactatttttttatggttttaga 303
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 281 ttgaaggtatgctgaatactatatgaatatgatacattacta-ttttttatggttttaga 223
Query: 304 gttttattatagaaagtc 321
| ||||||||||||||||
Sbjct: 222 gctttattatagaaagtc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 324
Length of database: 719
Length adjustment: 9
Effective length of query: 315
Effective length of database: 710
Effective search space: 223650
Effective search space used: 223650
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no171_h24.g1 MSMg01no171_h24.g1 CHROMAT_FILE:
MSMg01no171_h24.g1 PHD_FILE: MSMg01no171_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:41:44 2005
(333 letters)
>mm_chr15_16271396_16272128
Length = 733
Score = 621 bits (321), Expect = 0.0
Identities = 330/333 (99%)
Strand = Plus / Plus
Query: 1 acaattcatatctttacatttgttgaaataaaaaataaaaatctcaacttctcatagtgc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 acaattcatatctttacatttgttgaaataaaaaataaaaatctcagcttctcatagtgc 260
Query: 61 tgtctaaaactttgcatgtttcaactttatatgtgtccagaactttacagtcaaaaaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtctaaaactttgcatgtttcaactttatatgtgtccagaactttacagtcaaaaaggc 320
Query: 121 tatttgatgatacaaaaccgttgtgtttaaatgatctcagacatttgagtgtttatgaat 180
||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tatttgatgatgcaaaactgttgtgtttaaatgatctcagacatttgagtgtttatgaat 380
Query: 181 agtacatcaaattgtcagatgtggcaaacgtgagcaaatagaattttatttctacactat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtacatcaaattgtcagatgtggcaaacgtgagcaaatagaattttatttctacactat 440
Query: 241 atatatctttgcctatctaagttagaagtgtcctacggttaccaccagtgtgaaatttca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atatatctttgcctatctaagttagaagtgtcctacggttaccaccagtgtgaaatttca 500
Query: 301 tcctttgaccaggaaaacacttcaaatatctct 333
|||||||||||||||||||||||||||||||||
Sbjct: 501 tcctttgaccaggaaaacacttcaaatatctct 533
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 333
Length of database: 733
Length adjustment: 9
Effective length of query: 324
Effective length of database: 724
Effective search space: 234576
Effective search space used: 234576
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
