Query= MSMg01no174_l18.b1 MSMg01no174_l18.b1 CHROMAT_FILE:
MSMg01no174_l18.b1 PHD_FILE: MSMg01no174_l18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:40 2005
(153 letters)
>mm_chr15_72581134_72581686
Length = 553
Score = 265 bits (137), Expect = 9e-76
Identities = 143/145 (98%)
Strand = Plus / Minus
Query: 5 gaattcattttgtgccctgtgctcacaggtgaggattgttctgtcagaatcctgctgggc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 gaattcattttgtgccctgtgctcacaggtgaggattgttctgtcagaatcctgctgggc 290
Query: 65 gagagttctgcacagctcacttttaaagcccggcccttcccaacacacttggactgcaga 124
||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 aagagttctgcacatctcacttttaaagcccggcccttcccaacacacttggactgcaga 230
Query: 125 tgaggccgggggtgggtgttgtagg 149
|||||||||||||||||||||||||
Sbjct: 229 tgaggccgggggtgggtgttgtagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 153
Length of database: 553
Length adjustment: 8
Effective length of query: 145
Effective length of database: 545
Effective search space: 79025
Effective search space used: 79025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no174_l18.g1 MSMg01no174_l18.g1 CHROMAT_FILE:
MSMg01no174_l18.g1 PHD_FILE: MSMg01no174_l18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:45:40 2005
(290 letters)
>mm_chr15_72519456_72520144
Length = 689
Score = 543 bits (281), Expect = e-159
Identities = 287/289 (99%), Gaps = 1/289 (0%)
Strand = Plus / Plus
Query: 1 atttactttcagatgtgacccacagcaggtaaagttgagctaacaaagctgacaccctgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atttactttcagatgtgacccacagcaggtaaagttgagctaacaaagctgacaccctgt 260
Query: 61 gtgtacacagcctctcccttgcagcccaaaagctgtctggtacctgagcctaaatctgca 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtgtacacagcctcttccttgcagcccaaaagctgtctggtacctgagcctaaatctgca 320
Query: 121 agtggccaagctgtcagccaaggtacctgcctatgacataacactgtagtgcaggcagta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agtggccaagctgtcagccaaggtacctgcctatgacataacactgtagtgcaggcagta 380
Query: 181 agctaactcttaatatgcacatcttggcatttggggcgaaagataaattacaatggtgac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agctaactcttaatatgcacatcttggcatttggggcgaaagataaattacaatggtgac 440
Query: 241 agaattgttcttgtagaggaaatttccaaaattccctcctatgggaggg 289
|||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 441 agaattgttcttgtagag-aaatttccaaaattccctcctatgggaggg 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
