CAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTCACTATTACATAAGGAAAACATGATACATGTATTTAAAACTAGTA
GCCAGCATGAGTATGCATATGAGTCTTATCTTTCCATATCATAAAAACCT
ATGACAGACCTATTACAATTACTGAATTATACAAATTCTATTTGAATTCT
CATTCCTGGTCAATTATAATAATAATACAATGGTTAAAAATAAACTCAAA
TAATCTGTTTCAAAGCAGTAAATCTGCCAACTCTATTTACTTAATAAAGG
TCACATTCCACAATGTATAGAAATATTGCATATTTTGCCTACCTTTTGTT
ACTTTTGTTTTCATGAACACAGACTGGTAAGATGTCAGAAATATGTAGTG
TATATTTGACCCTTGTGGCTAGAAAGCATACTTGTGTATGTTCAATAACA
TTAATGGAGTCACATCTCTGAAAACCTTGGATTCTGGGACAGAAAAAAAA
AAGAGGGAGAAGAAGAAGAAGAGCTCAGATGTTGGTGACCTCTGTGACAG
AAAAGCATCTACTGAAAACTGGGTCCATGAAAGCACCTTTGAAAATATTT
GGAACTGAAAAACTTTGATCATGAATGTACCCTCAAAGCCCAAGAATCTA
AGTAGACTCTAGAGGATATCATGAAAGCATTGCTAAAATAATGTAATATT
TTA

GCCCCCCCCTCCGTCGATGTTTTGGGAGGCATGGNAAGNNCCCGTTTCCA
AAACAGGGCGGGGGNNNNNTANTTTTTCCTNAAAAAGGGGGGGGGGNNGG
GAAAGGGAGGAGGNAGGAGGGAAGGGAGGGGGTGGTTGCCCCCTCCGTGT
GGGGGGGTGGGCGGGGGGAGAGGGCGCGGGACGTGGTGAGCGGGGTGGTG
GGCGGGGGGGTTGTTGGTGTGTTCGGATTCGCGATGCATGTTCTGTGCGT
TCGCGGTTATAGGACGAGATATACTTATCCCNTTGGGTTTTGCCGTCATT
TGTCGGGCGGGCGGGGAGGGGGTGGCGGGGGCGCGGGCGGGATGGTATAT
ATAGAGGCGGCGTTGCGCGTTGTATTGAGATTAGGAGTCGCGCGGCCCCT
CCCCATTATTTGTATTTTTTTTACACCACNCGTTACCCTGCGCCTCGCCC
GCTTCCCCATCATCTCCACATTTTTTTTTTTTTGTGGGTCGCCGCCCCGC
CCCCCCCCGCGCGGGGGCGCGGTGAGGGATTGCGGTGTGGGGGGTGGTGG
GTATGTGTGGGTGTGTGTGGGCGCCCCCCACAACAAGAGGAAGATACAGT
TTTGGGGGCGGCGCGGAGGGGGTTGCAGTGTGGGGCGGTGATTATGTTGT
TTCCTGGCCGGTTTATATCGGGCCGGGAGTGTGATGCGTTAGTTGTGGAT
TGTTTGTGGTGTGATTGGCGGGTGGGGACGGGTAGGTGTGGTATGTGTAT
GTCTCCTCCTATGATGCATGTAGATGTACTTACGGCTGCGCGTCGTTATG
GGTGTAGCGGTGTATTTATNGTGTGCGGCGTCGTTGGCGTCGGTGATCGT
TGGTTGTGCTTGATTATTTAGTTATTGTTCTTATAGATAGGAGGTCGGCG
CTGGTCGTCGGGTAGCGCGCTTTCTGTGGATGGTGGGAGTCGTGAGGCTG
TGGCGGTTATCGGGCCTGTGTTGGTGACGGTGGCCGACGGTGACTGCTCG
TTCTCGCCGCTGTGGCGTATATATCTTGATCGACGAGCACTGCGTATTGT
ATTCNTGCTCGCAGTGTGCGGCCGACTGGTGTGCCGN

Query= MSMg01no175_j10.b1 MSMg01no175_j10.b1 CHROMAT_FILE:
MSMg01no175_j10.b1 PHD_FILE: MSMg01no175_j10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:46:42 2005
         (659 letters)



>mm_chr15_24463909_24464967
          Length = 1059

 Score = 1259 bits (651), Expect = 0.0
 Identities = 654/655 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctcactattacataaggaaaacatgatacatgtatttaaaactagtagccagcat 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcactattacataaggaaaacatgatacatgtatttaaaactagtagccagcat 264

                                                                       
Query: 65  gagtatgcatatgagtcttatctttccatatcataaaaacctatgacagacctattacaa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagtatgcatatgagtcttatctttccatatcataaaaacctatgacagacctattacaa 324

                                                                       
Query: 125 ttactgaattatacaaattctatttgaattctcattcctggtcaattataataataatac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttactgaattatacaaattctatttgaattctcattcctggtcaattataataataatac 384

                                                                       
Query: 185 aatggttaaaaataaactcaaataatctgtttcaaagcagtaaatctgccaactctattt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatggttaaaaataaactcaaataatctgtttcaaagcagtaaatctgccaactctattt 444

                                                                       
Query: 245 acttaataaaggtcacattccacaatgtatagaaatattgcatattttgcctaccttttg 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acttaataaaggtcacattccacaatgtatagaaatattgcatattttgcctaccttttg 504

                                                                       
Query: 305 ttacttttgttttcatgaacacagactggtaagatgtcagaaatatgtagtgtatatttg 364
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ttacttttgttttcatgaagacagactggtaagatgtcagaaatatgtagtgtatatttg 564

                                                                       
Query: 365 acccttgtggctagaaagcatacttgtgtatgttcaataacattaatggagtcacatctc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 acccttgtggctagaaagcatacttgtgtatgttcaataacattaatggagtcacatctc 624

                                                                       
Query: 425 tgaaaaccttggattctgggacagaaaaaaaaaagagggagaagaagaagaagagctcag 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgaaaaccttggattctgggacagaaaaaaaaaagagggagaagaagaagaagagctcag 684

                                                                       
Query: 485 atgttggtgacctctgtgacagaaaagcatctactgaaaactgggtccatgaaagcacct 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 atgttggtgacctctgtgacagaaaagcatctactgaaaactgggtccatgaaagcacct 744

                                                                       
Query: 545 ttgaaaatatttggaactgaaaaactttgatcatgaatgtaccctcaaagcccaagaatc 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttgaaaatatttggaactgaaaaactttgatcatgaatgtaccctcaaagcccaagaatc 804

                                                                  
Query: 605 taagtagactctagaggatatcatgaaagcattgctaaaataatgtaatatttta 659
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 taagtagactctagaggatatcatgaaagcattgctaaaataatgtaatatttta 859


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 659
Length of database: 1059
Length adjustment: 10
Effective length of query: 649
Effective length of database: 1049
Effective search space:   680801
Effective search space used:   680801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)