Query= MSMg01no177_o22.b1 MSMg01no177_o22.b1 CHROMAT_FILE:
MSMg01no177_o22.b1 PHD_FILE: MSMg01no177_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:35 2005
(609 letters)
>mm_chr15_36419065_36420073
Length = 1009
Score = 1118 bits (578), Expect = 0.0
Identities = 599/606 (98%)
Strand = Plus / Minus
Query: 4 ggaattcagtcacgtcctgtccactagaggacattgtcaaagactttgttattgttgttc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 809 ggaattcagtcacgtcctgtccactagaggacattgtcaaagactttgttattgttgttc 750
Query: 64 cacaaaaccttacttgtattcagtgacgacaggattgctttcagaacgctgtgccggctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 749 cacaaaaccttacttgtattcagtgacgacaggattgctttcagaacgctgtgccggctg 690
Query: 124 cttcctgtggagcagtgaccctgcagagctggattgttcttgggatgagggagtccattt 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 cttcctgtggagcagtgaccctgcagagctggattgttcttgggatgagggagtccattt 630
Query: 184 ggaatgtgaacacgtgtgtctgtcccctggcctgaggtctgtggtgtgtgtccacttggg 243
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 629 ggaatgtgaacacgtgtgtctatcccctggcctgaggtctgtggtgtgtgtccacttggg 570
Query: 244 ttatgagcagtcgccgctccctgggagatctaggagtgcgcacgggcatgggtggttgct 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 ttatgagcagtcgccgctccctgggagatctaggagtgcgcacgggcatgggtggttgct 510
Query: 304 ttctaactggaagccactggactcctttacagggataagaacaaccaagagcacggtgac 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 509 ttctaactggaagccactggactcctttacagggataagaacaaccaagagcacggagac 450
Query: 364 tccaggccaggctccctctcccacacactacttccctctgctgctttctgtgatgttagg 423
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tccaggttgggctccctctcccacacactacttccctctgctgctttctgtgatgttagg 390
Query: 424 cagcgtatgcactgagatctcacagtcctccccgcagccctcccctcggccctccccgaa 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 389 cagcgtatgcactgagatctcacagtcctccccgcagccctcccctcggccctccccaaa 330
Query: 484 gtcctccccacagccctccctgccttgtgcactgagatctcatggcccccttccccaaca 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 gtcctccccacagccctccctgccttgtgcactgagatctcatggcccccttccccaaca 270
Query: 544 tgctagttttgtatacattttgctccggcatcttagctttaatacctgcttctaattgct 603
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 tgccagttttgtatacattttgctccggcatcttagctttaatacctgcttctaattgct 210
Query: 604 cctcca 609
||||||
Sbjct: 209 cctcca 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 609
Length of database: 1009
Length adjustment: 10
Effective length of query: 599
Effective length of database: 999
Effective search space: 598401
Effective search space used: 598401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no177_o22.g1 MSMg01no177_o22.g1 CHROMAT_FILE:
MSMg01no177_o22.g1 PHD_FILE: MSMg01no177_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:50:36 2005
(637 letters)
>mm_chr15_36245048_36246083
Length = 1036
Score = 1160 bits (600), Expect = 0.0
Identities = 627/636 (98%), Gaps = 1/636 (0%)
Strand = Plus / Plus
Query: 1 tttgttcagctctgagccccatttttaaatggggttatttgattttctggagtccaccac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgttcagctctgagccccatttttaaatggggttatttgattttctggagtccaccac 260
Query: 61 agcccaaacccatctgcttagagatggcaacatccccaagtggctggtccttcctacatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agcccaaacccatctgcttagagatggcaacatccccaagtggctggtccttcctacatc 320
Query: 121 acttttagtaaatatcttatagacatggccacaaggccaagctggtcaaggtagtcctcc 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 acttttagtaaatatcttatagacatggccacaaggccaatctggtcaaggtagtcctcc 380
Query: 181 tagacctcctagacagtcagaggtgtgggtctccacttaaggatcaaagacactgtagta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tagacctcctagacagtcagaggtgtgggtctccacttaaggatcaaagacactgtagta 440
Query: 241 tgatgtctgcctatggtctgggggctgggggcaatgcatctattcaagaaaaaaaatcga 300
||||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||
Sbjct: 441 tgatgtctgcctatggtctgggggcaggggacaatgcatctattcaagaaaaaaa-tcga 499
Query: 301 gttttgacattctgagggctttcttctacttactgttccacttggggtcctggcctactg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gttttgacattctgagggctttcttctacttactgttccacttggggtcctggcctactg 559
Query: 361 aatagggacctgaacctacgctcaggttggtttgctcccttggcccacccgccacatgct 420
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 560 aatagggacctgaacctacgctcaggtcggtttgctccctcagcccacccgccacatgcc 619
Query: 421 ggttgtctctagaaacaccctcacagacacattttggaagcgttcctgactaccttgctg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggttgtctctagaaacaccctcacagacacattttggaagcgttcctgactaccttgctg 679
Query: 481 ggtgtctttcaatccaaccgcttgctcttctgagcctgtcctctgtccactcatctccca 540
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 680 ggtgtctttcaatccaaccgcttgctcttccgagcctgtcctctgtccactcatctccca 739
Query: 541 aacacatctcaaaccatgcttaatctcccaataaacagcatcacgaagtcgtaattttgc 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 aacacatctcaaaccatgcttaatctcccaataaacagcatcacgaagtcgtaattttgc 799
Query: 601 ctaatgtgatctaactagtctgcctgtgactgaaaa 636
||||||||||||||||||||||||||||||||||||
Sbjct: 800 ctaatgtgatctaactagtctgcctgtgactgaaaa 835
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 637
Length of database: 1036
Length adjustment: 10
Effective length of query: 627
Effective length of database: 1026
Effective search space: 643302
Effective search space used: 643302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
