Query= MSMg01no178_n12.b1 MSMg01no178_n12.b1 CHROMAT_FILE:
MSMg01no178_n12.b1 PHD_FILE: MSMg01no178_n12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:43 2005
(644 letters)
>mm_chr15_50456055_50457098
Length = 1044
Score = 992 bits (513), Expect = 0.0
Identities = 516/517 (99%)
Strand = Plus / Minus
Query: 1 ggaaaactggaaagtgttttctaaggaaaacaaagatgtaaactccatgtgtgctggtaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 ggaaaactggaaagtgttttctaaggaaaacaaagatgtaaactccatgtgtgctggtaa 458
Query: 61 ggagcaccgctggtacattgtcttcattcagtatttgttctattacttcaaaataaattc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 457 ggagcaccgctggtacattgtcttcattcagtatttgttctattacttcaaaataaattc 398
Query: 121 cttatgatactagagttaaatatgttactgagaggcatgccgcaaaacatatgaggtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 cttatgatactagagttaaatatgttactgagaggcatgccgcaaaacatatgaggtatg 338
Query: 181 ctttctaccacacaatatgaagacactcatctgcgaattcttttccactctccattggga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 ctttctaccacacaatatgaagacactcatctgcgaattcttttccactctccattggga 278
Query: 241 gggccaatgccaagctttaccatggtcttccagtctgtccgcctaatctatggaagcatt 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 277 gggccaatgccaagctttaccatggtcttccagtctgtccgcctaatctatagaagcatt 218
Query: 301 ctagtatctcctgtgacatttatttttattatttatatttacacttactttatttatctt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ctagtatctcctgtgacatttatttttattatttatatttacacttactttatttatctt 158
Query: 361 catgtgtatgaatgtatgcacaagccaatggttaccaagaaatgattctgtggagttggt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 157 catgtgtatgaatgtatgcacaagccaatggttaccaagaaatgattctgtggagttggt 98
Query: 421 ggactcattatactttatagagatccctgcaaatcaacttgattgaactggagtcatcag 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 97 ggactcattatactttatagagatccctgcaaatcaacttgattgaactggagtcatcag 38
Query: 481 gcttatacgtcaagcatttgtgccattgagctgtgtc 517
|||||||||||||||||||||||||||||||||||||
Sbjct: 37 gcttatacgtcaagcatttgtgccattgagctgtgtc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no178_n12.g1 MSMg01no178_n12.g1 CHROMAT_FILE:
MSMg01no178_n12.g1 PHD_FILE: MSMg01no178_n12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:51:43 2005
(623 letters)
>mm_chr15_50264617_50265639
Length = 1023
Score = 1158 bits (599), Expect = 0.0
Identities = 613/621 (98%), Gaps = 6/621 (0%)
Strand = Plus / Plus
Query: 1 actctgtagaccaggctggcctcaaactcagaaattcacctgcctctacctcccaagtgc 60
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 207 actctgtagaccaggctggcctca------gaaattcacctgcctctacctcccaagtgc 260
Query: 61 tagaattaaaggtgtgtgccatcaccgcctggctagaatgtgcttttctaacagaacaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagaattaaaggtgtgtgccatcaccgcctggctagaatgtgcttttctaacagaacaat 320
Query: 121 tttaatgaacaatcagaaaaaaaattcttcatatcatgacaatgaggtactaaagagctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttaatgaacaatcagaaaaaaaattcttcatatcatgacaatgaggtactaaagagctc 380
Query: 181 attatatattggtatgtagagctgaataggacctggactataaattagaattaccataaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attatatattggtatgtagagctgaataggacctggactataaattagaattaccataaa 440
Query: 241 atagagttttcctttgaaaagagtttaaagaatttcatataccaaaaagtcttctgtctg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atagagttttcctttgaaaagagtttaaagaatttcatataccaaaaagtcttctgtctg 500
Query: 301 atataaggcaaatatccttaacaaattaatcaacatctttctttaaaaaatacttcatga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atataaggcaaatatccttaacaaattaatcaacatctttctttaaaaaatacttcatga 560
Query: 361 acaaatgcattcattttcttaagataatctcaagtgtggtcttactgacctaaaatgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaaatgcattcattttcttaagataatctcaagtgtggtcttactgacctaaaatgtat 620
Query: 421 ataacctgttatatctctaaatgctgtccatcattgtctaatgcagctggtctaatttct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ataacctgttatatctctaaatgctgtccatcattgtctaatgcagctggtctaatttct 680
Query: 481 actatcatcatcaacagttcaaaactcttagggatccacttctttatcagggcatcatat 540
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 681 actatcatcatcaacagttcaaaactcttagggatccacttctttatcaggtcatcatat 740
Query: 541 ccaaaagtttgtgttttttccattctgaaggacaaaaaaggtctttttacagttttaatc 600
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccaacagtttgtgttttttccattctgaaggacaaaaaaggtctttttacagttttaatc 800
Query: 601 tcattttccgattgactagta 621
|||||||||||||||||||||
Sbjct: 801 tcattttccgattgactagta 821
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
