XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTTTTCAGCTGCTGCAGTATAGGATTAAAATCTGACCAGAAGGTGGTTG
GTACTCAGGGAGGAGAGGCGCTCGGGATAGATACTTCCTGCATCTTAGAT
ATTATTTTCTTGTTCAGAGTGAAAAGGTCTAAATTTTCCTTTGTCACTGT
AGTAATATCTTGACAACCTAAAAAAAAAAAAGTGATTTCCATGCTGATTA
AATATGCTGTAAGCACTGAGTTAGAGACCTGAGTGATATATAAATAACTA
AGAAACCCACAGTATGCTTGTGTCCTATTTTTAAAATTTATTTTTGCAGT
TTTTTTTCATATTTGAACAGCAAAAAAATTTTGAGCTCCCTTTGAGATGA
AAGAACGGTGTCTGTAAACTCTAGATTGTGGTCATTGTCACTTATACACT
GGAGGAAAGCTATAAAAGATCTAGTATAACACTTAATCATGTCGAAATAC
TTTGTAGCTATGTGGTTCTCATACATTAGCTCACATCAAATGGTATGCTA
TGGCATCTTGTTTACTACAGAGCAGAAAGGATTTATAACTTATTGATATA
GAGAAGCAATCATTTCATATAATATACATTGAAAATAATTCAGAAAAAGT
TTTATGACAGAATAAGTTCTGCAACAATGAAATTTATTATGAATGTTTCC
CACATTAAGAAAAATTN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXTCACCTGAGGAATACGGAATGGCAGAGAAGCAC
CTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAAC
AACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGATCAAAAATT
CAGGTGACAGCAGATGCTGGCGTGGATGTGGAGAAAGAGGAACACTCCTC
CATTGTTGGTGGGATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTG
GCGGTTCCTCAGAAAATTGGACATAGTACTACCGGAGGATCCAGCAATAC
CTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAGAAGGACACA
TGTGCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGAA
AGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTGGTACA
TCTACACAATGGAGTACTACTCAGCTATTAAAAAGAAGGAATTTATGAAA
TTCCTAGCCAAATGGATGGACCTGGAGGGGATCATCCTGAGTGAGGTAAC
ACATTCACAAAGAAACTCACACAATCTGTACTCACTGATAAGTGGATATT
AGCCCAATACCTAGGATACCCAAGATATAAGATACAATTTCCTAAACACA
CGACACTCAAGAAGAATGAAGAG

Query= MSMg01no179_h01.b1 MSMg01no179_h01.b1 CHROMAT_FILE:
MSMg01no179_h01.b1 PHD_FILE: MSMg01no179_h01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:52:27 2005
         (669 letters)



>mm_chr15_19769079_19770148
          Length = 1070

 Score = 1224 bits (633), Expect = 0.0
 Identities = 660/681 (96%), Gaps = 19/681 (2%)
 Strand = Plus / Minus

                                                                        
Query: 8    ttctttttcagctgctgcagtataggattaaaatctgaccagaaggtggttggtactcag 67
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1059 ttctttttcagctgctgcagtataggattaaaatctgaccagaaggtggttggtactcag 1000

                                                                        
Query: 68   ggaggagaggcgctcgggatagatacttcctgcatcttagatattattttcttgttcaga 127
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 999  ggaggagaggcgctcgggatagatacttcctgcatcttagatattattttcttgttcaga 940

                                                                        
Query: 128  gtgaaaaggtctaaattttcctttgtcactgtagtaatatcttgacaacctaaaaaaaaa 187
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 939  gtgaaaaggtctaaattttcctttgtcactgtagtaatatcttgacaacctaaaaaaaaa 880

                                                                        
Query: 188  a-------------------aagtgatttccatgctgattaaatatgctgtaagcactga 228
            |                   ||||||||||||||||||||||||||||||||||||||||
Sbjct: 879  aaaaaaaaaaaaaaaaaaagaagtgatttccatgctgattaaatatgctgtaagcactga 820

                                                                        
Query: 229  gttagagacctgagtgatatataaataactaagaaacccacagtatgcttgtgtcctatt 288
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819  gttagagacctgagtgatatataaataactaagaaacccacagtatgcttgtgtcctatt 760

                                                                        
Query: 289  tttaaaatttatttttgcagttttttttcatatttgaacagcaaaaaaattttgagctcc 348
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 759  tttaaaatttatttttgcagttttttttcatatttgaacagcaaaaaaattttgagctcc 700

                                                                        
Query: 349  ctttgagatgaaagaacggtgtctgtaaactctagattgtggtcattgtcacttatacac 408
            ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 699  ctttgagatgaaagaacggtgtctgtaaactctagattgtggtcactgtcacttatacac 640

                                                                        
Query: 409  tggaggaaagctataaaagatctagtataacacttaatcatgtcgaaatactttgtagct 468
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639  tggaggaaagctataaaagatctagtataacacttaatcatgtcgaaatactttgtagct 580

                                                                        
Query: 469  atgtggttctcatacattagctcacatcaaatggtatgctatggcatcttgtttactaca 528
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579  ttgtggttctcatacattagctcacatcaaatggtatgctatggcatcttgtttactaca 520

                                                                        
Query: 529  gagcagaaaggatttataacttattgatatagagaagcaatcatttcatataatatacat 588
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519  gagcagaaaggatttataacttattgatatagagaagcaatcatttcatataatatacat 460

                                                                        
Query: 589  tgaaaataattcagaaaaagttttatgacagaataagttctgcaacaatgaaatttatta 648
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459  tgaaaataattcagaaaaagttttatgacagaataagttctgcaacaatgaaatttatta 400

                                 
Query: 649  tgaatgtttcccacattaaga 669
            |||||||||||||||||||||
Sbjct: 399  tgaatgtttcccacattaaga 379


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 41
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 669
Length of database: 1070
Length adjustment: 10
Effective length of query: 659
Effective length of database: 1060
Effective search space:   698540
Effective search space used:   698540
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)