Query= MSMg01no181_j15.b1 MSMg01no181_j15.b1 CHROMAT_FILE:
MSMg01no181_j15.b1 PHD_FILE: MSMg01no181_j15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:06 2005
(547 letters)
>mm_chr15_89208913_89209858
Length = 946
Score = 990 bits (512), Expect = 0.0
Identities = 536/544 (98%), Gaps = 1/544 (0%)
Strand = Plus / Minus
Query: 4 ggaattccgtccatctgctgctgcaagccataagcgcccccaccagcgctatgggctcag 63
|||||||| |||| | | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 746 ggaattccttcca-caggtgctgcaagccataagcgcccccaccagcgctatgggctcag 688
Query: 64 aagtctgggtcggcacttggcggccacatcggccccgcggccccatcgcggcgctctaca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aagtctgggtcggcacttggcggccacatcggccccgcggccccatcgcggcgctctaca 628
Query: 124 gaggcccggggccaaaatacaagctgccaacgaacaccggtagcaagggcggatgcaggg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gaggcccggggccaaaatacaagctgccaacgaacaccggtagcaagggcggatgcaggg 568
Query: 184 gaggaaactgggaaggtgggactgtgggcggtctacactggtgccaggaggccaaggaac 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gaggaaactgggaaggtgggactgtgggcggtctacactggtgccaggaggccaaggaac 508
Query: 244 tggagaactgtgcccgaagcaaaaagggagggcagaagattagaggttctgtgcgggagc 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tggagaactgtgcccgaagcaaaaagggagggcagaagattagaggttctgtgcgggagc 448
Query: 304 tgcgttggtgaaatgggagagggaacggagctggcagcctctgggtcttgcgggaggtga 363
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 447 tgcgttggtgaaatgggagagggaacagagctggcagcctctgggtcttgcgggaggtga 388
Query: 364 cgcgggaatgcgcccccaggttacaaactgcacgacccgtctcggccgcgagcccccgcc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cgcgggaatgcgcccccaggttacaaactgcacgacccgtctcggccgcgagcccccgcc 328
Query: 424 ttctccttcggctcgcgtccccccatgcggtatgcaacctgcggacccgggccgagttac 483
|||||||||||||||||||| ||| ||||| |||||||||||||||||||||||||||||
Sbjct: 327 ttctccttcggctcgcgtccacccttgcggcatgcaacctgcggacccgggccgagttac 268
Query: 484 ctggtgcctgctcgcatgactgtgcgcggcacagttggctccccggccttctccatctac 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ctggtgcctgctcgcatgactgtgcgcggcacagttggctccccggccttctccatctac 208
Query: 544 ggtc 547
||||
Sbjct: 207 ggtc 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 946
Length adjustment: 10
Effective length of query: 537
Effective length of database: 936
Effective search space: 502632
Effective search space used: 502632
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_j15.g1 MSMg01no181_j15.g1 CHROMAT_FILE:
MSMg01no181_j15.g1 PHD_FILE: MSMg01no181_j15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:06 2005
(429 letters)
>mm_chr15_89097153_89097981
Length = 829
Score = 783 bits (405), Expect = 0.0
Identities = 423/429 (98%)
Strand = Plus / Plus
Query: 1 aagtggtcttaggatccaaatttaaattctggaaagtgaagctttctttgccgctcaggc 60
||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 aagtggtcttaggatccaagtttaaattctggaaagtgaagctttctttggggctcaggc 260
Query: 61 tggccctgggatctcagcaggttagatgtggtcacagccacttaaacaaagacagcctgt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggccctgggatctcagcaggttagatgtggtcacagccacttaaacaaagacagcctgt 320
Query: 121 gagccacagatgagagaacagatgtggggagtcagcagcagcagagcttctttgccccgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagccacagatgagagaacagatgtggggagtcagcagcagcagagcttctttgccccgg 380
Query: 181 accccatggaagggtgaccgtgccacacaggaggtgatgggtggggatcttgagattgct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 accccatggaagggtgaccgtgccacacaggaggtgatgggtggggatcttgagattgct 440
Query: 241 aggcactgagctcccagcctccctctcagtgggccttgaagctccatcagtagatgaagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aggcactgagctcccagcctccctctcagtgggccttgaagctccatcagtagatgaagg 500
Query: 301 ttctccgcagccagtggaccgtgttgaaaatgatggatgctccaattctccttcaaggca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ttctccgcagccagtggaccgtgttgaaaatgatggatgctccaattctccttcaaggca 560
Query: 361 cttgccttatgaccacatgttgagaagaacttcattatctcctggcgctggtcttgttgt 420
||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||
Sbjct: 561 cttgccttatgaccacatgttgagaagaacttcattatctcctggtgctgaccttgttgt 620
Query: 421 gcttttaaa 429
|||||||||
Sbjct: 621 gcttttaaa 629
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
