Query= MSMg01no181_p21.b1 MSMg01no181_p21.b1 CHROMAT_FILE:
MSMg01no181_p21.b1 PHD_FILE: MSMg01no181_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:36 2005
(673 letters)
>mm_chr15_81821479_81822551
Length = 1073
Score = 1290 bits (667), Expect = 0.0
Identities = 670/671 (99%)
Strand = Plus / Minus
Query: 2 gcggaattccatgcagttaactaggaaaagtgaatactctggagagcgtccagtggcccc 61
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 872 gcggaattccatgcagctaactaggaaaagtgaatactctggagagcgtccagtggcccc 813
Query: 62 tccccagccctcgtaggagggagtataaagtcagcaagccgcagctgatctccagggata 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 812 tccccagccctcgtaggagggagtataaagtcagcaagccgcagctgatctccagggata 753
Query: 122 gtcctcctatgaggggggtctgatttcatgaagtagcaactgtgtgtgctggtttcctcc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 gtcctcctatgaggggggtctgatttcatgaagtagcaactgtgtgtgctggtttcctcc 693
Query: 182 ctgtcctgagtaagcactgtggttgccagtcagttttctggaggcttccctggtatctcc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ctgtcctgagtaagcactgtggttgccagtcagttttctggaggcttccctggtatctcc 633
Query: 242 aggtgtgcagcctagccagctgtatacaaaatccagtaggccaagcctgtgttgattctt 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 aggtgtgcagcctagccagctgtatacaaaatccagtaggccaagcctgtgttgattctt 573
Query: 302 tcccaacaacagctcaagggtagggattggacccattacacaagaggaaactaaggcaga 361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 tcccaacaacagctcaagggtagggattggacccattacacaagaggaaactaaggcaga 513
Query: 362 gaagcatccaggtggccacgccatctttgaatctgggccatagtctcagacgtcatcact 421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 gaagcatccaggtggccacgccatctttgaatctgggccatagtctcagacgtcatcact 453
Query: 422 gaggcatggagcctttccagtgtgctggtttctataaggcagagtacggatggtttttgc 481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 gaggcatggagcctttccagtgtgctggtttctataaggcagagtacggatggtttttgc 393
Query: 482 ctgacatacctgcttcctaagaacacactaggcggatatttttgagatccctactgatag 541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 ctgacatacctgcttcctaagaacacactaggcggatatttttgagatccctactgatag 333
Query: 542 ccagccacccaggctacccgccttgcagggtgttgccactgtagccagtgcttggcacag 601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 ccagccacccaggctacccgccttgcagggtgttgccactgtagccagtgcttggcacag 273
Query: 602 actgcatgctcagtaaacttcaggttactaaagtaagccctccacagccattggctgtgg 661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 actgcatgctcagtaaacttcaggttactaaagtaagccctccacagccattggctgtgg 213
Query: 662 gtttccttaaa 672
|||||||||||
Sbjct: 212 gtttccttaaa 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 673
Length of database: 1073
Length adjustment: 10
Effective length of query: 663
Effective length of database: 1063
Effective search space: 704769
Effective search space used: 704769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_p21.g1 MSMg01no181_p21.g1 CHROMAT_FILE:
MSMg01no181_p21.g1 PHD_FILE: MSMg01no181_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:36 2005
(521 letters)
>mm_chr15_81709155_81710074
Length = 920
Score = 977 bits (505), Expect = 0.0
Identities = 517/521 (99%), Gaps = 1/521 (0%)
Strand = Plus / Plus
Query: 1 accaatggagctgacttcaaatgagggtcaaagccctctcttgctatgagccagccataa 60
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 accaatggagctgacttcaaatgagggtcaaagccctctcttgctatgagagagccataa 260
Query: 61 tttaaatactatataatacatggctgaagtaatatttagatgctggccctcaatacagac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttaaatactatataatacatggctgaagtaatatttagatgctggccctcaatacagac 320
Query: 121 tcagccctctggtttgatacccagatgtggtaatgaatatttagtctacttactgctgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcagccctctggtttgatacccagatgtggtaatgaatatttagtctacttactgctgtt 380
Query: 181 gtagatgttggagctgtgagctcaggcctgggggaactggaatcatatcagttgtcacat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtagatgttggagctgtgagctcaggcctgggggaactggaatcatatcagttgtcacat 440
Query: 241 actgacttcaggttcttttacttgtcacagacctaggacattttttttttcaaaagtctg 300
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 441 actgacttcaggttcttttacttgtcacagacctaggacattttttttt-caaaagtctg 499
Query: 301 tttgttttttgagacagggtttctttgtgtagccttggctgtcctggacctagctctata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tttgttttttgagacagggtttctttgtgtagccttggctgtcctggacctagctctata 559
Query: 361 gaccaggctggcctcaaattcagagatctgtctgtcctaggtggtcttttaccagggttg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gaccaggctggcctcaaattcagagatctgtctgtcctaggtggtcttttaccagggttg 619
Query: 421 acccacttgtccttcacagtaaccctaaaatgtcagcattcccagcctgcttttgtaatg 480
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 acctacttgtccttcacagtaaccctaaaatgtcagcattcccagcctgcttttgtaatg 679
Query: 481 ataaaattgaggcccatagatgttgactaattcatcttagg 521
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 ataaaattgaggcccatagatgttgactaattcatcttagg 720
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 521
Length of database: 920
Length adjustment: 10
Effective length of query: 511
Effective length of database: 910
Effective search space: 465010
Effective search space used: 465010
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
