Query= MSMg01no182_a17.b1 MSMg01no182_a17.b1 CHROMAT_FILE:
MSMg01no182_a17.b1 PHD_FILE: MSMg01no182_a17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:40 2005
(448 letters)
>mm_chr15_6131234_6132080
Length = 847
Score = 797 bits (412), Expect = 0.0
Identities = 436/448 (97%), Gaps = 9/448 (2%)
Strand = Plus / Plus
Query: 5 gaattcaccatggataactccatttattcagtaatggcttcccttcaccaagatgtatgg 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccatggagaattccatttattcagtaatggcttcccttcaccaagatgtatgg 264
Query: 65 ttggttcttcagccaaagtaaacaaatatatgattaagttaagcatttgtttaattttaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttggttcttcagccaaagtaaacaaatatatgattaagttaagcatttgtttaattttaa 324
Query: 125 ataaagtggttaaacattattaattccgtaacttgcccacaaggtagtaaacaacaagaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ataaagtggttaaacattattaattccgtaacttgcccacaaggtagtaaacaacaagaa 384
Query: 185 gaaacaacacttaatacaaatgtttccctaactagaaagaaaattctctgaattgtctag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gaaacaacacttaatacaaatgtttccctaactagaaagaaaattctctgaattgtctag 444
Query: 245 atttatttccttattgtctgtccttcaactcaattgagctacctccccaaactgatagga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atttatttccttattgtctgtccttcaactcaattgagctacctccccaaactgatagga 504
Query: 305 gaaaaaaaatgatcaaaataaatctcaaggtattactactacattatttttaggattagg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gaaaaaaaatgatcaaaataaatctcaaggtattactactacattatttttaggattagg 564
Query: 365 aaggagaacccc----gcacagctatatcttcctagttatttatgngattgtaaattaat 420
|||||||| | ||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 565 aaggagaa----atttggacagctatatcttcctagttatttatg-gattgtaaattaat 619
Query: 421 atgtcttaactgattatcatttgatata 448
||||||||||||||||||||||||||||
Sbjct: 620 atgtcttaactgattatcatttgatata 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 847
Length adjustment: 10
Effective length of query: 438
Effective length of database: 837
Effective search space: 366606
Effective search space used: 366606
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_a17.g1 MSMg01no182_a17.g1 CHROMAT_FILE:
MSMg01no182_a17.g1 PHD_FILE: MSMg01no182_a17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:41 2005
(467 letters)
>mm_chr15_6320912_6321778
Length = 867
Score = 721 bits (373), Expect = 0.0
Identities = 404/421 (95%), Gaps = 12/421 (2%)
Strand = Plus / Minus
Query: 1 actatacagaccaggctagccttgaaatcacaggactctccctgcccctgcctcctgagt 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 actatacagaccagactagccttgaaatcacaggactctccctgcccctgcctcctgagt 567
Query: 61 gctgggattataggcatatgccactactcctggcgaggttcatggttttaactggtactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gctgggattataggcatatgccactactcctggcgaggttcatggttttaactggtactc 507
Query: 121 acactggaaataaaagcccaggtagggacaggtgctggtatttgtattggttatatatta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 acactggaaataaaagcccaggtagggacaggtgctggtatttgtattggttatatatta 447
Query: 181 tgactgtggagttgggttagatataccccaaaacatctggcaatgtgaaaatgaaggaat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tgactgtggagttgggttagatataccccaaaacatctggcaatgtgaaaatgaaggaag 387
Query: 241 attataatctgctcagtactaattttagataatttgttcatgtgttttagcaagtagata 300
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 386 attataatctgctcagtactaattttagataatttgttcaagtgttttagcaagtagata 327
Query: 301 atgtgaacaggttaaaaagagttcctaatatg------ccccccgacggttgtgaaccac 354
|||||||||||||||||||||||||||||||| ||| ||||||| ||||
Sbjct: 326 atgtgaacaggttaaaaagagttcctaatatgtttatt------gacagttgtgagccac 273
Query: 355 catgtggttgctgggaattgatctcaggacctttggaagagcagtcagcactcttaacca 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 catgtggttgctgggaattgatctcaggacctttggaagagcagtcagcactcttaacca 213
Query: 415 c 415
|
Sbjct: 212 c 212
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 867
Length adjustment: 10
Effective length of query: 457
Effective length of database: 857
Effective search space: 391649
Effective search space used: 391649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
