Query= MSMg01no182_e13.b1 MSMg01no182_e13.b1 CHROMAT_FILE:
MSMg01no182_e13.b1 PHD_FILE: MSMg01no182_e13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:59 2005
(243 letters)
>mm_chr15_89625093_89625734
Length = 642
Score = 424 bits (219), Expect = e-123
Identities = 237/243 (97%), Gaps = 1/243 (0%)
Strand = Plus / Plus
Query: 1 cttcacatgctagagggaagcattgattccagaatcctccaagttatagtctgacatctg 60
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 201 cttcacatgctagagggaagcattgattccagaatcctctgagttatagtctgacatctg 260
Query: 61 acttccacaatgccttttggcaaacatgcatccacacccacacccaaaataaatgaaaca 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acttccacagtgccttttggcaaacatgcatccacacccacacccaaaataaatgaaaca 320
Query: 121 caaaatattgtttttaaatcctttttttcccctgtggaatgaagtcagaattttgattgg 180
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct: 321 caaaatattgtttttaaatcatttttc-cccctgtggaatgaagtcagaattttgattgg 379
Query: 181 catcacagtcagcctgtgggttttgttcagtagtacagcaaccttcgtggaattgattcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 catcacagtcagcctgtgggttttgttcagtagtacagcaaccttcgtggaattgattcc 439
Query: 241 gtg 243
|||
Sbjct: 440 gtg 442
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 243
Length of database: 642
Length adjustment: 9
Effective length of query: 234
Effective length of database: 633
Effective search space: 148122
Effective search space used: 148122
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no182_e13.g1 MSMg01no182_e13.g1 CHROMAT_FILE:
MSMg01no182_e13.g1 PHD_FILE: MSMg01no182_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:59 2005
(334 letters)
>mm_chr15_89785545_89786278
Length = 734
Score = 615 bits (318), Expect = e-180
Identities = 330/334 (98%)
Strand = Plus / Minus
Query: 1 cacctagccactgtcccccaaaccacaaagctcccctgcttttgcttcttcctgaaagac 60
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 534 cacctagccactgttccccaaaccacaaagctcccctgcttttgcttcttcctgaaagac 475
Query: 61 cccttccggctttttttaggcaactttgttttgagtaaaaggtttcctttcacgctgttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 474 cccttccggctttttttaggcaactttgttttgagtaaaaggtttcctttcacgctgttt 415
Query: 121 cacacaattgccaaaaatgtctatgtagaagaatgattctggtgtcaggaggagcacccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 414 cacacaattgccaaaaatgtctatgtagaagaatgattctggtgtcaggaggagcacccc 355
Query: 181 ttctgaggttcacccgcttctctctgtcacctgaaattacagcgcttctaatttattctg 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 354 ttctgaggttcacccgcttctctctgtcacctgaaattacagcgcttccaatttattctg 295
Query: 241 attccctctgcctgtgtgaaacacatttggggaccttcaccattccaaccagatgagcaa 300
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 294 attcactctgcctgtgtgaaacacatttggggaccttcaccattccaaccagatgagcaa 235
Query: 301 tcactatttcaaatgaaaacatctcccttgggag 334
||||||||||||||||||||||||||||| ||||
Sbjct: 234 tcactatttcaaatgaaaacatctcccttcggag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 334
Length of database: 734
Length adjustment: 9
Effective length of query: 325
Effective length of database: 725
Effective search space: 235625
Effective search space used: 235625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
